Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20invadans_20[genbank_20GCA_5F000520115.1_202014-01-15] 481 sequences; 71,402,472 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq476 190 9e-46 seq14 143 1e-31 >seq476 Length=1058 Score = 190 bits (210), Expect = 9e-46 Identities = 138/160 (86%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||||||||||||||||| |||||| || | || |||||||| | ||||||||||||| Sbjct 499 GAGTCGAGTTGTTTGGGAATACAGCTCAAAGTAGGTGGTAAATTCCATCTAAAGCTAAAT 558 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 ||||| ||||||||||||| ||||||| |||| ||||||||||||| |||||| || Sbjct 559 ATTGGTGCGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAA 618 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||||||||||| || || ||||| ||||||||||||| || Sbjct 619 AGAGAGTTAAAGAGTACCTGAAACTGTTGAAAGGGAACCG 658 Score = 86.0 bits (94), Expect = 3e-14 Identities = 82/104 (79%), Gaps = 1/104 (1%) Strand=Plus/Plus Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445 |||||| ||||| | || ||||||||| |||||||||||||||||||||||| | | Sbjct 955 CTGGCGAAATGGAGCGATACGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTGT 1014 Query 446 GCGAGTGTTTGGGTGT-CAAACCCGTGCGCGTAATGAAAGTGAA 488 || ||| || |||||| |||||| ||| ||||||||| || Sbjct 1015 GCAAGTATTAGGGTGTGGAAACCCAAATGCGCAATGAAAGTAAA 1058 >seq14 Length=1185136 Score = 143 bits (158), Expect = 1e-31 Identities = 105/120 (88%), Gaps = 4/120 (3%) Strand=Plus/Plus Query 512 GCACCATCGACCGATCCTGATGTCTTCGGATG---GATTTGAGTAAGAGCATAGCTGTTG 568 |||| ||||||||||| ||| || ||| || |||||||||| ||||||| ||||| Sbjct 205382 GCACTATCGACCGATCATGAAC-CTCCGGGTGAAAGATTTGAGTATGAGCATATATGTTG 205440 Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 205441 GTACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGGGGAAACTCTGGTGGA 205500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079989682550