Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20invadans_20[genbank_20GCA_5F000520115.1_202014-01-15] 481 sequences; 71,402,472 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq115 192 1e-46 seq22 102 2e-19 >seq115 Length=78495 Score = 192 bits (212), Expect = 1e-46 Identities = 173/219 (79%), Gaps = 9/219 (4%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||| | | ||||| |||||||||| | | ||||||||||| | ||||| Sbjct 19005 GCATCTTCACGGATAATTCAAATTCACTGAGTTTATGTTGGAGACAGCGGGGATGTCGTT 19064 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 || |||||| |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 19065 ACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTCA 19124 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATC 192 |||||||||||||||||| ||| ||| || | ||| || ||| | Sbjct 19125 GAGTTACGGCCGCCGTTTACTGGGACTTTCATTCAAAGC---------GCAAACTTTTCC 19175 Query 193 AATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATA 231 ||||| ||||| |||||||||||| |||| |||||||| Sbjct 19176 TATTAATCTTCCAGCACCGGGCAGGTGTCAGACCCTATA 19214 >seq22 Length=1013315 Score = 102 bits (112), Expect = 2e-19 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 |||||||| |||||| ||||||||||||||| | |||||||||||||||||||||||||| Sbjct 577642 ATCGTTACACCATTCATGCAGGTCGGAACTTCCACGACAAGGAATTTCGCTACCTTAGGA 577583 Query 127 CCGTTA 132 |||||| Sbjct 577582 CCGTTA 577577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260793935552