Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20invadans_20[genbank_20GCA_5F000520115.1_202014-01-15] 481 sequences; 71,402,472 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq115 183 6e-44 seq22 93.3 9e-17 >seq115 Length=78495 Score = 183 bits (202), Expect = 6e-44 Identities = 173/219 (79%), Gaps = 9/219 (4%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | | | ||| ||||| |||| ||| | ||||||| | | ||||| Sbjct 19005 GCATCTTCACGGATAATTCAAATTCACTGAGTTTATGTTGGAGACAGCGGGGATGTCGTT 19064 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 || || ||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct 19065 ACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTCA 19124 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCC 186 ||||||||||||||||||||||| || |||| ||| | || | ||| ||| Sbjct 19125 GAGTTACGGCCGCCGTTTACTGGGACT----TTCA----TTC-AAAGCGCAAACTTTTCC 19175 Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATA 225 |||| |||||||||||||||||| ||||| |||||| Sbjct 19176 TATTAATCTTCCAGCACCGGGCAGGTGTCAGACCCTATA 19214 >seq22 Length=1013315 Score = 93.3 bits (102), Expect = 9e-17 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 |||||||| || ||| ||| ||||||||||| | |||||||||||||||||||||||||| Sbjct 577642 ATCGTTACACCATTCATGCAGGTCGGAACTTCCACGACAAGGAATTTCGCTACCTTAGGA 577583 Query 121 CCGTTA 126 |||||| Sbjct 577582 CCGTTA 577577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062394889856