Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20invadans_20[genbank_20GCA_5F000520115.1_202014-01-15] 481 sequences; 71,402,472 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq277 288 2e-75 >seq277 Length=2894 Score = 288 bits (318), Expect = 2e-75 Identities = 213/245 (87%), Gaps = 4/245 (2%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2379 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCC 2320 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCG- 135 ||||||| | | | | | | ||||||||||||||| | ||| |||| | | | Sbjct 2319 AACTTCCTTCAGTTAGTCACTGAAAGTCCCTCTAAGAAGTCCTT-ACCTACCAAATTGGT 2261 Query 136 ATG--GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 | | || |||||||||| | ||||||||||||||| ||||||||||||||||||||| Sbjct 2260 AAGCAGGACTATTTAGCACGCGGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCA 2201 Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 2200 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAAT 2141 Query 254 CTGTC 258 ||||| Sbjct 2140 CTGTC 2136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796796287161