Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20invadans_20[genbank_20GCA_5F000520115.1_202014-01-15] 481 sequences; 71,402,472 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq71 333 5e-89 >seq71 Length=149896 Score = 333 bits (368), Expect = 5e-89 Identities = 233/264 (88%), Gaps = 1/264 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| |||||| ||||| ||||||| ||||| || Sbjct 5977 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTTTAAACGCAGCTCAAGTTCCATA 6036 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||| |||||||||| |||| || |||||||| ||||| ||||||||||||||||| Sbjct 6037 TTAGTAGGTGAACAATGCAACAATTGGCGAATTCTACTTCGCAATGATAGGAAGAGCCGA 6096 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||| ||| |||| | |||||||||||||||||||||||||||||||||||||| Sbjct 6097 CATCGAAGAATCCAAAA-ATATGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 6155 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||||||| | ||||| | | ||||||||||||| ||| Sbjct 6156 CTGTGGTAACTTTTCTGACACCTCTAGCTTAAAATTCAAAAGAACTAAAGGATCGAGAGG 6215 Query 271 CCACACTTTCATGGTTTGTATTCA 294 |||| |||||| |||||||||||| Sbjct 6216 CCACGCTTTCACGGTTTGTATTCA 6239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854395890336