Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20invadans_20[genbank_20GCA_5F000520115.1_202014-01-15] 481 sequences; 71,402,472 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq277 140 3e-31 >seq277 Length=2894 Score = 140 bits (154), Expect = 3e-31 Identities = 140/179 (78%), Gaps = 7/179 (4%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC----GAATACATTACCA 68 |||||| |||||||||||||| ||| ||||||||| ||||||| |||||||||| || Sbjct 1641 TTTACTGTGAAAAAATTAGAGTGTTTAAAGCAGGCGTTTGCTCATTTGAATACATTAGCA 1700 Query 69 TGGAATAATAGAATAGGA-CGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAAT 127 |||||||||| ||| || | || | |||||||||| ||||| | | | | ||||| Sbjct 1701 TGGAATAATAAGATACGACCTTGGTGGTCTATTTTGTTGGTTTGCACGCCAG--GGTAAT 1758 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 ||| |||| ||| ||| |||||| | |||| | |||| ||||||||||||||||| Sbjct 1759 GATTAATAGGGACAGTTGGGGGTATTCATATTTCAACGTCAGAGGTGAAATTCTTGGAT 1817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511997614240