Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20invadans_20[genbank_20GCA_5F000520115.1_202014-01-15] 481 sequences; 71,402,472 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq71 280 5e-73 >seq71 Length=149896 Score = 280 bits (310), Expect = 5e-73 Identities = 258/321 (80%), Gaps = 18/321 (6%) Strand=Plus/Plus Query 85 CCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCGCGAAG--GACCT 142 ||||||||||||||||||||||| ||||| || || | || |||| || || || Sbjct 2209 CCCAGCCAAACTCCCCACCTGACGATGTCTTCCACGTAGCTCA-CCCGATAAATCGAGCT 2267 Query 143 TAACGCCAGAAAATGGT-----CGGTGAAGACCAGTTCCGCTTCATTGAT----TAAGTa 193 | | | |||| || || || | |||| |||| | ||||| |||||| Sbjct 2268 TCAATCTAGAACTGGGCACCCGCGAGGATGGCCAGG--CGCTAC-TTGATGGGATAAGTA 2324 Query 194 aaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACA 253 ||| ||| || |||| |||||||||||||||||| | |||||| ||||||||||| Sbjct 2325 AAACAACATTAGAAGTAGCGGTATTTCACTTGCGCCGGA---GCTCCCGCTTATTCTACA 2381 Query 254 CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCC 313 |||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct 2382 CCTCCTAAGTCATTTCACAACGTCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCC 2441 Query 314 GCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAG 373 ||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||| Sbjct 2442 GCTGATTTTTCCAAGCCCGTTCCCTTGGCTGTGGGTTCGCTAGACAGTAGATAGGGACAG 2501 Query 374 TGGGAATCTCGTTAATCCATT 394 |||||||||| |||||||||| Sbjct 2502 TGGGAATCTCATTAATCCATT 2522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635192134688