Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20invadans_20[genbank_20GCA_5F000520115.1_202014-01-15] 481 sequences; 71,402,472 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq23 98.7 2e-18 >seq23 Length=920215 Score = 98.7 bits (108), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 7/216 (3%) Strand=Plus/Plus Query 67 TTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCAC--GCTACT 124 |||| |||| | || ||||| ||||||| | | | ||||| || |||| | || | Sbjct 237358 TTTTCTTCCTTAATGAAAGAGCTTTACAACCTATT-AGCCTTCTTCACTCACTTGGTATT 237416 Query 125 TGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGT 184 ||||| ||| || ||| ||||| |||||||||||||||||||||| | ||| Sbjct 237417 --GCTGGATCAAGCTTTCGCTCATTGTCCAATATTCCTCACTGCTGCCTTTAAAAA-AGT 237473 Query 185 TTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTA 244 |||| |||||||||||| ||||||||| || | | || ||| | | ||| |||||| Sbjct 237474 TTGGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCTTTCAAATCAGCTAAAGATCGTA 237533 Query 245 GGCTAGGT-GGGCCGTTACCCCGCCTACTACCTAAT 279 |||| ||| | | ||| | || |||||||||| Sbjct 237534 GGCTTGGTAAGTCTTTTAAACTACCAACTACCTAAT 237569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068794859072