Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aurantiochytrium_20sp._20T66_20[genbank_20GCA_5F001462505.1_202015- 12-09] 1,847 sequences; 43,429,441 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq61 214 3e-53 >seq61 Length=466 Score = 214 bits (236), Expect = 3e-53 Identities = 196/246 (80%), Gaps = 20/246 (8%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| || |||| ||||||| ||| |||||||||||| | Sbjct 292 GTACAAAGGGCAGGGACGTATTCAATGCAAGCT-GATGACTTGCGTTTACTAGGAATT-C 235 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAG-ATT 119 ||||||| ||| || |||||||| ||||| ||||| |||||||| || |||| ||| Sbjct 234 CTCGTTGGAGATTAATAATTGCAAAAATCTAGCCCCAGCACGATGAGCGTTGAAAGGATT 175 Query 120 ACCCGGACCTGTCGGCCAAGG-------TG----------ATAGACTCGTTGAATACATC 162 | || ||| |||| ||| || | |||| ||||||| |||| Sbjct 174 AGCCATGCCTTCCGGCAAAGCAACTCGCTGCGAGCAGCGAAAAGACCCGTTGAACCCATC 115 Query 163 AGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAA 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 114 AGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCGA 55 Query 223 ACTTCC 228 |||||| Sbjct 54 ACTTCC 49 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751986544605