Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aurantiochytrium_20sp._20T66_20[genbank_20GCA_5F001462505.1_202015- 12-09] 1,847 sequences; 43,429,441 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq68 141 2e-31 >seq68 Length=694 Score = 141 bits (156), Expect = 2e-31 Identities = 174/230 (76%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 91 AGAGTGTTCAAAGCAGGCCTTT-GCTC-GAATACATTAGCATGGAATAATAGAATAGGAC 148 ||||||||| ||||||| | | | || | || ||| |||| || || ||||||| Sbjct 57 AGAGTGTTCCAAGCAGGTCGTACGATCTGGATGT-TTATTATGGGATGATCAGATAGGAC 115 Query 149 GTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGG 208 | ||| ||||||||||||||| | | | ||||||||||||||| | ||| |||| Sbjct 116 TCG-GGTGCTATTTTGTTGGTTTGCACATCTGA-GTAATGATTAATAGGAACAGTTGGGG 173 Query 209 GTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCG 268 || | ||||| | | ||||||||||||||||||||| ||||| |||||| ||| Sbjct 174 GTATTCGTATTTAGGAGCTAGAGGTGAAATTCTTGGATTTCCGAAAGACGAACTACAGCG 233 Query 269 AAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 || || || |||||| |||||||||||||||| |||||||||| |||| Sbjct 234 AAGGCATTTACCAAGCATGTTTTCATTAATCA-AGAACGAAAGTCTGGGG 282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915183096256