Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aurantiochytrium_20sp._20T66_20[genbank_20GCA_5F001462505.1_202015- 12-09] 1,847 sequences; 43,429,441 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq119 183 1e-43 seq206 163 1e-37 >seq119 Length=1541 Score = 183 bits (202), Expect = 1e-43 Identities = 223/297 (75%), Gaps = 19/297 (6%) Strand=Plus/Plus Query 390 CGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGA 449 || |||||| | || | |||||||||| ||||||| |||||||| | || | ||||| Sbjct 115 CGAAATGGTCGCAAACCGCCCGTCTTGAAACACGGTTCAAGGAGTGTTACGAATGTGCGA 174 Query 450 GTGTTTGGGTGTC--AAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGA 507 ||| || |||| ||||| |||||| | |||||| ||| ||||||| | || Sbjct 175 GTGCTTTGGTGGTGAAAACCAATGCGCGGAGTGAAAGCGAA-GGAGGTG------CTGGA 227 Query 508 GGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTT 567 || ||||| |||||| |||| || ||| | ||||||||| |||| | || Sbjct 228 -----CAGCATCGGCCGATCATGAT--CTGCGG-TAGATTTGAGTTGGAGCGCATTCGTA 279 Query 568 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 627 | |||||||||||||||||||||||| || |||||| ||| ||| |||||||||| ||| Sbjct 280 GCGACCCGAAAGATGGTGAACTATGCTTGGGTAGGGTAAAGTCAGGGGAAACTCTGATGG 339 Query 628 AGGCTCGC-AGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | || || | |||||||| |||| ||||||||||| ||| || |||||||||||| Sbjct 340 AAGCCTGCAAACGGTTCTGACGTG-AAATCGATCGTGAAAACTGAGTATAGGGGCGA 395 >seq206 Length=445 Score = 163 bits (180), Expect = 1e-37 Identities = 143/177 (81%), Gaps = 1/177 (1%) Strand=Plus/Plus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||| | |||||| |||| |||||| |||||| | || |||| |||||||| | ||||||| Sbjct 264 TTCTAGGAGTCGTGTTGCTTGGGACTGCAGCGCAAAGTGGGTGGTAAATTCCATCTAAAG 323 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 ||||||| | | |||||||||||| | | ||||| |||| ||||||||||||| ||| Sbjct 324 CTAAATACGGACGAGAGACCGATAGTGGAAAAGTACTGTGAAGGAAAGATGAAAAGAACT 383 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAG 210 ||| |||||||| | ||||| || |||||| | ||||||||||| | |||| |||| Sbjct 384 TTGAAAAGAGAG-TGAAAAGTACCTGAAATCGCTGAAAGGGAAGGGTTTGCGCCCAG 439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079960381850