Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aurantiochytrium_20sp._20T66_20[genbank_20GCA_5F001462505.1_202015- 12-09] 1,847 sequences; 43,429,441 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq8 111 4e-22 >seq8 Length=7525 Score = 111 bits (122), Expect = 4e-22 Identities = 194/277 (70%), Gaps = 18/277 (6%) Strand=Plus/Minus Query 8 ACACT-GCATCTTCAC-AGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGC 65 ||||| || ||||||| ||| | | |||||||| ||| | ||||||| | | Sbjct 3983 ACACTCGCTTCTTCACGAGCAAATA-AATTTCACAGAGATTATTTAAGAGACAGTGAAAC 3925 Query 66 CATCGTTACGCCATTCGTGCAGG-TCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 124 || |||| |||||| ||| || || || ||| ||| ||||||||||||||||| Sbjct 3924 AGTCATTACTCCATTCATGCGGGATCATAA-TTAGTGACCAATGAATTTCGCTACCTTAG 3866 Query 125 GACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTA 184 ||| || | ||||| |||||||||||| || ||| ||| | |||| | Sbjct 3865 GACAGTCAGAGTTACTGCCGCCGTTTACTGGTTCTTAGATTCA-----------TAGCAA 3817 Query 185 ACCCCATCAA--TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTC 242 | | || || |||| | | |||||||||||| |||| | ||||| |||||| | Sbjct 3816 AAACTATAAACTTTAAAATAACAGCACCGGGCAGGAGTCAGCCTTTATACTACCACTTAC 3757 Query 243 GTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGC 279 ||||||||| || ||||||||||| |||||||| || Sbjct 3756 GTGTTTGCAAAGACCTGTGTTTTTATTAAACAGTTGC 3720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260776713024