Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aurantiochytrium_20sp._20T66_20[genbank_20GCA_5F001462505.1_202015- 12-09] 1,847 sequences; 43,429,441 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq8 138 2e-30 >seq8 Length=7525 Score = 138 bits (152), Expect = 2e-30 Identities = 233/333 (70%), Gaps = 17/333 (5%) Strand=Plus/Minus Query 26 AATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGG-TC 84 |||||||| ||| |||| ||||||||| | || |||| || ||| |||||| || Sbjct 3958 AATTTCACAGAGATTATTTAAGAGACAGTGAAACAGTCATTACTCCATTCATGCGGGATC 3899 Query 85 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTT 144 || ||| ||| |||||||||||||||||||| || | |||||| |||||||||| Sbjct 3898 ATAA-TTAGTGACCAATGAATTTCGCTACCTTAGGACAGTCAGAGTTACTGCCGCCGTTT 3840 Query 145 ACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCCCCTTAACCTTCCAGCACC 204 ||||| |||| |||| | | | || ||| | |||| | ||||||| Sbjct 3839 ACTGGTTCTTAGATTCATAG---CAAAAACTATAA------ACTTTAAAATAACAGCACC 3789 Query 205 GGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTA 264 ||||||| |||||| ||||| | ||| || || ||| | |||||||||||| || Sbjct 3788 GGGCAGGAGTCAGCCTTTATACTACCACTTACGTGTTTGCAAAGACCTGTGTTTTTATTA 3729 Query 265 AACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCA--TAGAC----AGGCACCCCTTCTC 318 |||||| ||| |||||| ||| | | | || || | | ||| |||| Sbjct 3728 AACAGTTGCTATTTCCTATTTGTTGCATTTTCTTATTTAAACTAAGAAGTCCCCTTTCTT 3669 Query 319 CCTAAGTTACGGGGTCATTTTGCCGAGTTCCTT 351 || ||||||| |||||| ||||||||||||||| Sbjct 3668 CCGAAGTTACAGGGTCAATTTGCCGAGTTCCTT 3636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062380377472