Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aurantiochytrium_20sp._20T66_20[genbank_20GCA_5F001462505.1_202015- 12-09] 1,847 sequences; 43,429,441 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq8 132 1e-28 >seq8 Length=7525 Score = 132 bits (146), Expect = 1e-28 Identities = 232/333 (70%), Gaps = 20/333 (6%) Strand=Plus/Plus Query 156 ACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAAC 215 ||||||| |||||||||||||||||||||||| ||| |||| |||||||||| ||| Sbjct 5732 ACAGGTGTTGCATGGTTGTCGTCAGCTCGTGTTTTGAAATGTATGGTTAAGTCCTTAAAC 5791 Query 216 GAGCGCAACCCTTAAGCTTAG--TTGCCATCATTAAGTTGGGCACTCTAAGTTGACTGCC 273 ||||| |||| ||| |||| ||| | || || || || |||| | Sbjct 5792 GAGCGAAACCTTTA--CTTAAATTTGTTA-CA--AATTTAAGCT-----AGTTTA----- 5836 Query 274 GGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGG 333 | | | |||| ||| | | ||| | | |||||| ||||| |||||||| |||||| Sbjct 5837 GATAATAAACTTGAGAA---TTAAGACAAAGACAAATCTTCATGACCCTTATGTTTTGGG 5893 Query 334 CTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATC 393 || || |||||||||||||| | ||||| | ||| | | | || | ||||| | | Sbjct 5894 CTGCAAACGTGCTACAATGGTAATAACAAAAAGAAGCAATAGAGAGATCTAAAGCATACC 5953 Query 394 CCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATC 453 |||| | | ||||| ||||| || || ||||| || || |||||||| | Sbjct 5954 TTTTAAATATTACTTTAGTTCAGATTGAAGATTGAAACTCATCTTCATTAAGCTGGAGTT 6013 Query 454 GCTAGTAATCGTAGATCAGCATGCTACGGTGAA 486 || |||||||||| |||| | | ||||||||| Sbjct 6014 GCCAGTAATCGTAAATCATTACGTTACGGTGAA 6046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503972221120