Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aurantiochytrium_20sp._20T66_20[genbank_20GCA_5F001462505.1_202015- 12-09] 1,847 sequences; 43,429,441 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq68 187 4e-45 seq61 127 3e-27 >seq68 Length=694 Score = 187 bits (206), Expect = 4e-45 Identities = 112/118 (95%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 141 GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACC 200 ||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||| Sbjct 642 GCTATTTAGTAGGCCGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCACTCCACC 583 Query 201 AACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 582 AACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAATCTGTC 525 >seq61 Length=466 Score = 127 bits (140), Expect = 3e-27 Identities = 94/106 (89%), Gaps = 4/106 (4%) Strand=Plus/Minus Query 13 CCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 119 CCATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 60 Query 73 CTCAAACTTCCATTGGCTGGAAGCC-AATA-GTCCCTCTAAGAAGC 116 ||| ||||||| || | || || || | ||||||||||||||| Sbjct 59 CTCGAACTTCC--TGCTCGTAAACCGAACATGTCCCTCTAAGAAGC 16 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796785743007