Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aurantiochytrium_20sp._20T66_20[genbank_20GCA_5F001462505.1_202015- 12-09] 1,847 sequences; 43,429,441 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq8 114 2e-23 seq118 82.4 1e-13 >seq8 Length=7525 Score = 114 bits (126), Expect = 2e-23 Identities = 95/116 (82%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGC 219 |||||||||| ||||| ||| || |||||| |||||| ||||||| || | ||| | ||| Sbjct 4526 GATAGGGACCAAACTGCCTCACGGCGTTCTAAACCCAACTCGCGTACCGCATTACTCGGC 4467 Query 220 GAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||||||| ||||||||| ||| || |||| ||||| || || ||| |||||||| Sbjct 4466 GAACAGCCAAACCCTTGGAACCAGCTACAGCTCCAGGTTGCGATGAGTCGACATCG 4411 >seq118 Length=1300 Score = 82.4 bits (90), Expect = 1e-13 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 173 CTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACC 232 ||||||| ||||| ||| |||||||||| ||| || ||||| ||| ||||| || ||| Sbjct 409 CTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTTTTAACGGGTGAACAATCCGACC 468 Query 233 CTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||| | ||| || || | |||||| || |||||||||||| Sbjct 469 ATTGCGCCCTTCTGCAAGCGCAGGATAGGAAGAGCCGACATCG 511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780786029292