Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aurantiochytrium_20sp._20T66_20[genbank_20GCA_5F001462505.1_202015- 12-09] 1,847 sequences; 43,429,441 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq8 93.3 1e-16 >seq8 Length=7525 Score = 93.3 bits (102), Expect = 1e-16 Identities = 110/147 (75%), Gaps = 4/147 (3%) Strand=Plus/Plus Query 139 TAGGGGTGAAAGGCTAAA-CAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGG 197 |||| |||||||||||| |||||||| |||||||||||| | ||||| ||||||||| Sbjct 2918 TAGGAGTGAAAGGCTAATTCAAACTTGATCATAGCTGGTTCTTTGCGAAATCTATTTAGG 2977 Query 198 TAGTGCCTCAAGTATCACCATCGGGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGA 257 ||| | | | ||| | ||||||||||||||||| || |||||| || | Sbjct 2978 TAGAGTGCTATATTTCATTTTAAGGGGTAGAGCACTGTTAAGGAACGGGGGTTTTT---A 3034 Query 258 CTTACCAAACCATTGCAAACTCCGAAT 284 | ||| || | ||||||||| ||||| Sbjct 3035 CCTACTAATTCTTTGCAAACTTCGAAT 3061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689568793088