Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011-
02-15] 1,185 sequences; 56,660,572 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq11 242 6e-62
seq2 242 6e-62
>seq11
Length=1405779
Score = 242 bits (268), Expect = 6e-62
Identities = 192/228 (84%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||||| |
Sbjct 96857 GTACAAAGGGCAGGGACGTAATCAATGCGAGCT-GATGACTCGCGTTTACTAGGAATT-C 96914
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|||||| | || | |||||||| ||| ||||| |||||| | |||| ||||||
Sbjct 96915 CTCGTTCATGATTGAAAATTGCAACAATCAATCCCAATCACGGCACACGTTCACAGATTA 96974
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||| | |||| || |||||||||||||||||||| | |||||||||||||||||||
Sbjct 96975 CCCAGGCCTGCCGACCAAGGTGATAGACTCGTTGCGTGTGCCAGTGTAGCGCGCGTGCGG 97034
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||| |||||||||||||||||||||||||||||||| | | |||||
Sbjct 97035 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCCCCAGCTTCC 97082
Score = 242 bits (268), Expect = 6e-62
Identities = 192/228 (84%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||||| |
Sbjct 139367 GTACAAAGGGCAGGGACGTAATCAATGCGAGCT-GATGACTCGCGTTTACTAGGAATT-C 139424
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|||||| | || | |||||||| ||| ||||| |||||| | |||| ||||||
Sbjct 139425 CTCGTTCATGATTGAAAATTGCAACAATCAATCCCAATCACGGCACACGTTCACAGATTA 139484
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||| | |||| || |||||||||||||||||||| | |||||||||||||||||||
Sbjct 139485 CCCAGGCCTGCCGACCAAGGTGATAGACTCGTTGCGTGTGCCAGTGTAGCGCGCGTGCGG 139544
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||| |||||||||||||||||||||||||||||||| | | |||||
Sbjct 139545 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCCCCAGCTTCC 139592
Score = 242 bits (268), Expect = 6e-62
Identities = 192/228 (84%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||||| |
Sbjct 322035 GTACAAAGGGCAGGGACGTAATCAATGCGAGCT-GATGACTCGCGTTTACTAGGAATT-C 322092
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|||||| | || | |||||||| ||| ||||| |||||| | |||| ||||||
Sbjct 322093 CTCGTTCATGATTGAAAATTGCAACAATCAATCCCAATCACGGCACACGTTCACAGATTA 322152
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||| | |||| || |||||||||||||||||||| | |||||||||||||||||||
Sbjct 322153 CCCAGGCCTGCCGACCAAGGTGATAGACTCGTTGCGTGTGCCAGTGTAGCGCGCGTGCGG 322212
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||| |||||||||||||||||||||||||||||||| | | |||||
Sbjct 322213 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCCCCAGCTTCC 322260
Score = 242 bits (268), Expect = 6e-62
Identities = 192/228 (84%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||||| |
Sbjct 362725 GTACAAAGGGCAGGGACGTAATCAATGCGAGCT-GATGACTCGCGTTTACTAGGAATT-C 362668
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|||||| | || | |||||||| ||| ||||| |||||| | |||| ||||||
Sbjct 362667 CTCGTTCATGATTGAAAATTGCAACAATCAATCCCAATCACGGCACACGTTCACAGATTA 362608
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||| | |||| || |||||||||||||||||||| | |||||||||||||||||||
Sbjct 362607 CCCAGGCCTGCCGACCAAGGTGATAGACTCGTTGCGTGTGCCAGTGTAGCGCGCGTGCGG 362548
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||| |||||||||||||||||||||||||||||||| | | |||||
Sbjct 362547 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCCCCAGCTTCC 362500
Score = 242 bits (268), Expect = 6e-62
Identities = 192/228 (84%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||||| |
Sbjct 544759 GTACAAAGGGCAGGGACGTAATCAATGCGAGCT-GATGACTCGCGTTTACTAGGAATT-C 544702
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|||||| | || | |||||||| ||| ||||| |||||| | |||| ||||||
Sbjct 544701 CTCGTTCATGATTGAAAATTGCAACAATCAATCCCAATCACGGCACACGTTCACAGATTA 544642
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||| | |||| || |||||||||||||||||||| | |||||||||||||||||||
Sbjct 544641 CCCAGGCCTGCCGACCAAGGTGATAGACTCGTTGCGTGTGCCAGTGTAGCGCGCGTGCGG 544582
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||| |||||||||||||||||||||||||||||||| | | |||||
Sbjct 544581 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCCCCAGCTTCC 544534
Score = 242 bits (268), Expect = 6e-62
Identities = 192/228 (84%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||||| |
Sbjct 599191 GTACAAAGGGCAGGGACGTAATCAATGCGAGCT-GATGACTCGCGTTTACTAGGAATT-C 599248
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|||||| | || | |||||||| ||| ||||| |||||| | |||| ||||||
Sbjct 599249 CTCGTTCATGATTGAAAATTGCAACAATCAATCCCAATCACGGCACACGTTCACAGATTA 599308
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||| | |||| || |||||||||||||||||||| | |||||||||||||||||||
Sbjct 599309 CCCAGGCCTGCCGACCAAGGTGATAGACTCGTTGCGTGTGCCAGTGTAGCGCGCGTGCGG 599368
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||| |||||||||||||||||||||||||||||||| | | |||||
Sbjct 599369 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCCCCAGCTTCC 599416
>seq2
Length=3465789
Score = 242 bits (268), Expect = 6e-62
Identities = 192/228 (84%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||||| |
Sbjct 3164827 GTACAAAGGGCAGGGACGTAATCAATGCGAGCT-GATGACTCGCGTTTACTAGGAATT-C 3164770
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|||||| | || | |||||||| ||| ||||| |||||| | |||| ||||||
Sbjct 3164769 CTCGTTCATGATTGAAAATTGCAACAATCAATCCCAATCACGGCACACGTTCACAGATTA 3164710
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||| | |||| || |||||||||||||||||||| | |||||||||||||||||||
Sbjct 3164709 CCCAGGCCTGCCGACCAAGGTGATAGACTCGTTGCGTGTGCCAGTGTAGCGCGCGTGCGG 3164650
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||| |||||||||||||||||||||||||||||||| | | |||||
Sbjct 3164649 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCCCCAGCTTCC 3164602
Score = 242 bits (268), Expect = 6e-62
Identities = 192/228 (84%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||||| |
Sbjct 3325940 GTACAAAGGGCAGGGACGTAATCAATGCGAGCT-GATGACTCGCGTTTACTAGGAATT-C 3325997
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|||||| | || | |||||||| ||| ||||| |||||| | |||| ||||||
Sbjct 3325998 CTCGTTCATGATTGAAAATTGCAACAATCAATCCCAATCACGGCACACGTTCACAGATTA 3326057
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||| | |||| || |||||||||||||||||||| | |||||||||||||||||||
Sbjct 3326058 CCCAGGCCTGCCGACCAAGGTGATAGACTCGTTGCGTGTGCCAGTGTAGCGCGCGTGCGG 3326117
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||| |||||||||||||||||||||||||||||||| | | |||||
Sbjct 3326118 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCCCCAGCTTCC 3326165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751991367275
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |