Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq11 242 6e-62 seq2 242 6e-62 >seq11 Length=1405779 Score = 242 bits (268), Expect = 6e-62 Identities = 192/228 (84%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||||| | Sbjct 96857 GTACAAAGGGCAGGGACGTAATCAATGCGAGCT-GATGACTCGCGTTTACTAGGAATT-C 96914 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| | || | |||||||| ||| ||||| |||||| | |||| |||||| Sbjct 96915 CTCGTTCATGATTGAAAATTGCAACAATCAATCCCAATCACGGCACACGTTCACAGATTA 96974 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| | |||| || |||||||||||||||||||| | ||||||||||||||||||| Sbjct 96975 CCCAGGCCTGCCGACCAAGGTGATAGACTCGTTGCGTGTGCCAGTGTAGCGCGCGTGCGG 97034 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||| |||||||||||||||||||||||||||||||| | | ||||| Sbjct 97035 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCCCCAGCTTCC 97082 Score = 242 bits (268), Expect = 6e-62 Identities = 192/228 (84%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||||| | Sbjct 139367 GTACAAAGGGCAGGGACGTAATCAATGCGAGCT-GATGACTCGCGTTTACTAGGAATT-C 139424 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| | || | |||||||| ||| ||||| |||||| | |||| |||||| Sbjct 139425 CTCGTTCATGATTGAAAATTGCAACAATCAATCCCAATCACGGCACACGTTCACAGATTA 139484 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| | |||| || |||||||||||||||||||| | ||||||||||||||||||| Sbjct 139485 CCCAGGCCTGCCGACCAAGGTGATAGACTCGTTGCGTGTGCCAGTGTAGCGCGCGTGCGG 139544 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||| |||||||||||||||||||||||||||||||| | | ||||| Sbjct 139545 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCCCCAGCTTCC 139592 Score = 242 bits (268), Expect = 6e-62 Identities = 192/228 (84%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||||| | Sbjct 322035 GTACAAAGGGCAGGGACGTAATCAATGCGAGCT-GATGACTCGCGTTTACTAGGAATT-C 322092 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| | || | |||||||| ||| ||||| |||||| | |||| |||||| Sbjct 322093 CTCGTTCATGATTGAAAATTGCAACAATCAATCCCAATCACGGCACACGTTCACAGATTA 322152 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| | |||| || |||||||||||||||||||| | ||||||||||||||||||| Sbjct 322153 CCCAGGCCTGCCGACCAAGGTGATAGACTCGTTGCGTGTGCCAGTGTAGCGCGCGTGCGG 322212 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||| |||||||||||||||||||||||||||||||| | | ||||| Sbjct 322213 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCCCCAGCTTCC 322260 Score = 242 bits (268), Expect = 6e-62 Identities = 192/228 (84%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||||| | Sbjct 362725 GTACAAAGGGCAGGGACGTAATCAATGCGAGCT-GATGACTCGCGTTTACTAGGAATT-C 362668 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| | || | |||||||| ||| ||||| |||||| | |||| |||||| Sbjct 362667 CTCGTTCATGATTGAAAATTGCAACAATCAATCCCAATCACGGCACACGTTCACAGATTA 362608 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| | |||| || |||||||||||||||||||| | ||||||||||||||||||| Sbjct 362607 CCCAGGCCTGCCGACCAAGGTGATAGACTCGTTGCGTGTGCCAGTGTAGCGCGCGTGCGG 362548 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||| |||||||||||||||||||||||||||||||| | | ||||| Sbjct 362547 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCCCCAGCTTCC 362500 Score = 242 bits (268), Expect = 6e-62 Identities = 192/228 (84%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||||| | Sbjct 544759 GTACAAAGGGCAGGGACGTAATCAATGCGAGCT-GATGACTCGCGTTTACTAGGAATT-C 544702 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| | || | |||||||| ||| ||||| |||||| | |||| |||||| Sbjct 544701 CTCGTTCATGATTGAAAATTGCAACAATCAATCCCAATCACGGCACACGTTCACAGATTA 544642 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| | |||| || |||||||||||||||||||| | ||||||||||||||||||| Sbjct 544641 CCCAGGCCTGCCGACCAAGGTGATAGACTCGTTGCGTGTGCCAGTGTAGCGCGCGTGCGG 544582 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||| |||||||||||||||||||||||||||||||| | | ||||| Sbjct 544581 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCCCCAGCTTCC 544534 Score = 242 bits (268), Expect = 6e-62 Identities = 192/228 (84%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||||| | Sbjct 599191 GTACAAAGGGCAGGGACGTAATCAATGCGAGCT-GATGACTCGCGTTTACTAGGAATT-C 599248 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| | || | |||||||| ||| ||||| |||||| | |||| |||||| Sbjct 599249 CTCGTTCATGATTGAAAATTGCAACAATCAATCCCAATCACGGCACACGTTCACAGATTA 599308 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| | |||| || |||||||||||||||||||| | ||||||||||||||||||| Sbjct 599309 CCCAGGCCTGCCGACCAAGGTGATAGACTCGTTGCGTGTGCCAGTGTAGCGCGCGTGCGG 599368 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||| |||||||||||||||||||||||||||||||| | | ||||| Sbjct 599369 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCCCCAGCTTCC 599416 >seq2 Length=3465789 Score = 242 bits (268), Expect = 6e-62 Identities = 192/228 (84%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||||| | Sbjct 3164827 GTACAAAGGGCAGGGACGTAATCAATGCGAGCT-GATGACTCGCGTTTACTAGGAATT-C 3164770 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| | || | |||||||| ||| ||||| |||||| | |||| |||||| Sbjct 3164769 CTCGTTCATGATTGAAAATTGCAACAATCAATCCCAATCACGGCACACGTTCACAGATTA 3164710 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| | |||| || |||||||||||||||||||| | ||||||||||||||||||| Sbjct 3164709 CCCAGGCCTGCCGACCAAGGTGATAGACTCGTTGCGTGTGCCAGTGTAGCGCGCGTGCGG 3164650 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||| |||||||||||||||||||||||||||||||| | | ||||| Sbjct 3164649 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCCCCAGCTTCC 3164602 Score = 242 bits (268), Expect = 6e-62 Identities = 192/228 (84%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||||| | Sbjct 3325940 GTACAAAGGGCAGGGACGTAATCAATGCGAGCT-GATGACTCGCGTTTACTAGGAATT-C 3325997 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| | || | |||||||| ||| ||||| |||||| | |||| |||||| Sbjct 3325998 CTCGTTCATGATTGAAAATTGCAACAATCAATCCCAATCACGGCACACGTTCACAGATTA 3326057 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| | |||| || |||||||||||||||||||| | ||||||||||||||||||| Sbjct 3326058 CCCAGGCCTGCCGACCAAGGTGATAGACTCGTTGCGTGTGCCAGTGTAGCGCGCGTGCGG 3326117 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||| |||||||||||||||||||||||||||||||| | | ||||| Sbjct 3326118 CCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCCCCAGCTTCC 3326165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751991367275