Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq11 100 2e-19 >seq11 Length=1405779 Score = 100 bits (110), Expect = 2e-19 Identities = 93/117 (79%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||| ||||||||||| || |||| || ||||| | | | | | |||| Sbjct 98362 GAACCCAAAGATTTTGATTTCTCATACAGTGCTGACGGAGTCGAGAACAAACGACCGCCA 98421 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | ||||||||||||| |||||||||||||| ||||||| ||| ||||||| Sbjct 98422 -ATCCTGAATCGGCATAGTTTATGGTTAAGACTACGATGGTATCTAATCATCTTCGA 98477 Score = 100 bits (110), Expect = 2e-19 Identities = 93/117 (79%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||| ||||||||||| || |||| || ||||| | | | | | |||| Sbjct 361292 GAACCCAAAGATTTTGATTTCTCATACAGTGCTGACGGAGTCGAGAACAAACGACCGCCA 361233 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | ||||||||||||| |||||||||||||| ||||||| ||| ||||||| Sbjct 361232 -ATCCTGAATCGGCATAGTTTATGGTTAAGACTACGATGGTATCTAATCATCTTCGA 361177 Score = 100 bits (110), Expect = 2e-19 Identities = 93/117 (79%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||| ||||||||||| || |||| || ||||| | | | | | |||| Sbjct 543311 GAACCCAAAGATTTTGATTTCTCATACAGTGCTGACGGAGTCGAGAACAAACGACCGCCA 543252 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | ||||||||||||| |||||||||||||| ||||||| ||| ||||||| Sbjct 543251 -ATCCTGAATCGGCATAGTTTATGGTTAAGACTACGATGGTATCTAATCATCTTCGA 543196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278396907150