Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq11 257 3e-66 >seq11 Length=1405779 Score = 257 bits (284), Expect = 3e-66 Identities = 212/252 (84%), Gaps = 6/252 (2%) Strand=Plus/Minus Query 70 GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGC-TCGAATACATTAGC 128 ||| |||||| ||||||||| ||||||||||| |||||| | || | |||||||||||| Sbjct 98727 GACGTTTACTGTGAAAAAATCAGAGTGTTCAACGCAGGCTTACGCCTTGAATACATTAGC 98668 Query 129 ATGGAATAATAGAATAGGACGT--GCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186 |||||||||| ||||||| | ||||| ||||||||||||||| | | ||| |||| Sbjct 98667 ATGGAATAATGAGATAGGACCTTGGCGGT-CTATTTTGTTGGTTTGCACG-CCGAGGTAA 98610 Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 ||||||| ||||| || |||| | | |||||||||||||||||||||||||||||||| Sbjct 98609 TGATTAAAAGGGACGGTTGGGGTTCTTCGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 98550 Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306 |||| |||||| |||| |||||||||||| | |||||| ||| |||||||||| |||| Sbjct 98549 TTATGGAAGACGAACTGCTGCGAAAGCGTCGAACAAGGACGTTCTCATTAATCA-AGAAC 98491 Query 307 GAAAGTTAGGGG 318 |||||||||||| Sbjct 98490 GAAAGTTAGGGG 98479 Score = 257 bits (284), Expect = 3e-66 Identities = 212/252 (84%), Gaps = 6/252 (2%) Strand=Plus/Plus Query 70 GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGC-TCGAATACATTAGC 128 ||| |||||| ||||||||| ||||||||||| |||||| | || | |||||||||||| Sbjct 360927 GACGTTTACTGTGAAAAAATCAGAGTGTTCAACGCAGGCTTACGCCTTGAATACATTAGC 360986 Query 129 ATGGAATAATAGAATAGGACGT--GCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186 |||||||||| ||||||| | ||||| ||||||||||||||| | | ||| |||| Sbjct 360987 ATGGAATAATGAGATAGGACCTTGGCGGT-CTATTTTGTTGGTTTGCACG-CCGAGGTAA 361044 Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 ||||||| ||||| || |||| | | |||||||||||||||||||||||||||||||| Sbjct 361045 TGATTAAAAGGGACGGTTGGGGTTCTTCGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 361104 Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306 |||| |||||| |||| |||||||||||| | |||||| ||| |||||||||| |||| Sbjct 361105 TTATGGAAGACGAACTGCTGCGAAAGCGTCGAACAAGGACGTTCTCATTAATCA-AGAAC 361163 Query 307 GAAAGTTAGGGG 318 |||||||||||| Sbjct 361164 GAAAGTTAGGGG 361175 Score = 257 bits (284), Expect = 3e-66 Identities = 212/252 (84%), Gaps = 6/252 (2%) Strand=Plus/Plus Query 70 GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGC-TCGAATACATTAGC 128 ||| |||||| ||||||||| ||||||||||| |||||| | || | |||||||||||| Sbjct 542946 GACGTTTACTGTGAAAAAATCAGAGTGTTCAACGCAGGCTTACGCCTTGAATACATTAGC 543005 Query 129 ATGGAATAATAGAATAGGACGT--GCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186 |||||||||| ||||||| | ||||| ||||||||||||||| | | ||| |||| Sbjct 543006 ATGGAATAATGAGATAGGACCTTGGCGGT-CTATTTTGTTGGTTTGCACG-CCGAGGTAA 543063 Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 ||||||| ||||| || |||| | | |||||||||||||||||||||||||||||||| Sbjct 543064 TGATTAAAAGGGACGGTTGGGGTTCTTCGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 543123 Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306 |||| |||||| |||| |||||||||||| | |||||| ||| |||||||||| |||| Sbjct 543124 TTATGGAAGACGAACTGCTGCGAAAGCGTCGAACAAGGACGTTCTCATTAATCA-AGAAC 543182 Query 307 GAAAGTTAGGGG 318 |||||||||||| Sbjct 543183 GAAAGTTAGGGG 543194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915189154880