Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011-
02-15] 1,185 sequences; 56,660,572 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq11 269 4e-70
seq2 269 4e-70
>seq11
Length=1405779
Score = 269 bits (298), Expect = 4e-70
Identities = 209/245 (85%), Gaps = 4/245 (2%)
Strand=Plus/Plus
Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 97016 CAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCCCC 97075
Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-AGCCAC--CAACCATAGT 133
| ||||| | || | | || | ||||||||||||||| || || ||| | | |
Sbjct 97076 AGCTTCCTTCGGTTAGTCACCGAAAGTCCCTCTAAGAAGTTGAGGCAATGCAAGCGCATT 97135
Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193
| | |||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 97136 CCCACAG-CTATTTAGCAGGCGGGGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCA 97194
Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 97195 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAAT 97254
Query 254 CTGTC 258
|||||
Sbjct 97255 CTGTC 97259
Score = 269 bits (298), Expect = 4e-70
Identities = 209/245 (85%), Gaps = 4/245 (2%)
Strand=Plus/Plus
Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 139526 CAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCCCC 139585
Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-AGCCAC--CAACCATAGT 133
| ||||| | || | | || | ||||||||||||||| || || ||| | | |
Sbjct 139586 AGCTTCCTTCGGTTAGTCACCGAAAGTCCCTCTAAGAAGTTGAGGCAATGCAAGCGCATT 139645
Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193
| | |||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 139646 CCCACAG-CTATTTAGCAGGCGGGGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCA 139704
Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 139705 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAAT 139764
Query 254 CTGTC 258
|||||
Sbjct 139765 CTGTC 139769
Score = 269 bits (298), Expect = 4e-70
Identities = 209/245 (85%), Gaps = 4/245 (2%)
Strand=Plus/Plus
Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 322194 CAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCCCC 322253
Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-AGCCAC--CAACCATAGT 133
| ||||| | || | | || | ||||||||||||||| || || ||| | | |
Sbjct 322254 AGCTTCCTTCGGTTAGTCACCGAAAGTCCCTCTAAGAAGTTGAGGCAATGCAAGCGCATT 322313
Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193
| | |||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 322314 CCCACAG-CTATTTAGCAGGCGGGGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCA 322372
Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 322373 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAAT 322432
Query 254 CTGTC 258
|||||
Sbjct 322433 CTGTC 322437
Score = 269 bits (298), Expect = 4e-70
Identities = 209/245 (85%), Gaps = 4/245 (2%)
Strand=Plus/Minus
Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 362566 CAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCCCC 362507
Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-AGCCAC--CAACCATAGT 133
| ||||| | || | | || | ||||||||||||||| || || ||| | | |
Sbjct 362506 AGCTTCCTTCGGTTAGTCACCGAAAGTCCCTCTAAGAAGTTGAGGCAATGCAAGCGCATT 362447
Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193
| | |||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 362446 CCCACAG-CTATTTAGCAGGCGGGGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCA 362388
Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 362387 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAAT 362328
Query 254 CTGTC 258
|||||
Sbjct 362327 CTGTC 362323
Score = 269 bits (298), Expect = 4e-70
Identities = 209/245 (85%), Gaps = 4/245 (2%)
Strand=Plus/Minus
Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 544600 CAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCCCC 544541
Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-AGCCAC--CAACCATAGT 133
| ||||| | || | | || | ||||||||||||||| || || ||| | | |
Sbjct 544540 AGCTTCCTTCGGTTAGTCACCGAAAGTCCCTCTAAGAAGTTGAGGCAATGCAAGCGCATT 544481
Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193
| | |||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 544480 CCCACAG-CTATTTAGCAGGCGGGGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCA 544422
Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 544421 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAAT 544362
Query 254 CTGTC 258
|||||
Sbjct 544361 CTGTC 544357
Score = 269 bits (298), Expect = 4e-70
Identities = 209/245 (85%), Gaps = 4/245 (2%)
Strand=Plus/Plus
Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 599350 CAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCCCC 599409
Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-AGCCAC--CAACCATAGT 133
| ||||| | || | | || | ||||||||||||||| || || ||| | | |
Sbjct 599410 AGCTTCCTTCGGTTAGTCACCGAAAGTCCCTCTAAGAAGTTGAGGCAATGCAAGCGCATT 599469
Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193
| | |||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 599470 CCCACAG-CTATTTAGCAGGCGGGGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCA 599528
Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 599529 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAAT 599588
Query 254 CTGTC 258
|||||
Sbjct 599589 CTGTC 599593
>seq2
Length=3465789
Score = 269 bits (298), Expect = 4e-70
Identities = 209/245 (85%), Gaps = 4/245 (2%)
Strand=Plus/Plus
Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 3326099 CAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCCCC 3326158
Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-AGCCAC--CAACCATAGT 133
| ||||| | || | | || | ||||||||||||||| || || ||| | | |
Sbjct 3326159 AGCTTCCTTCGGTTAGTCACCGAAAGTCCCTCTAAGAAGTTGAGGCAATGCAAGCGCATT 3326218
Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193
| | |||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 3326219 CCCACAG-CTATTTAGCAGGCGGGGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCA 3326277
Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 3326278 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAAT 3326337
Query 254 CTGTC 258
|||||
Sbjct 3326338 CTGTC 3326342
Score = 208 bits (230), Expect = 1e-51
Identities = 173/208 (83%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 3164668 CAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCCCC 3164609
Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-AGCCAC--CAACCATAGT 133
| ||||| | || | | || | ||||||||||||||| || || ||| | | |
Sbjct 3164608 AGCTTCCTTCGGTTAGTCACCGAAAGTCCCTCTAAGAAGTTGAGGCAATGCAAGCGCATT 3164549
Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193
| | |||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 3164548 CCCACAG-CTATTTAGCAGGCGGGGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCA 3164490
Query 194 CTCCACCAACTAAGAACGGCCATGCACC 221
||||||||||||||||||||||||||||
Sbjct 3164489 CTCCACCAACTAAGAACGGCCATGCACC 3164462
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796790852985
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