Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011-
02-15] 1,185 sequences; 56,660,572 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq11 363 3e-98
seq2 363 3e-98
>seq11
Length=1405779
Score = 363 bits (402), Expect = 3e-98
Identities = 243/268 (91%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 28 CGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCC 87
|| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 93220 CGTTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCC 93279
Query 88 CTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGC 147
|| |||||||||||||||||| || ||| || |||||| | ||||||||||||||
Sbjct 93280 CTGTTAGTGGGTGAACAATCCTACACTTGGTGACTTCTGCGACACAATGATAGGAAGAGC 93339
Query 148 CGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 207
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 93340 CGACATCGAAGAATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 93399
Query 208 TCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA-CTAAAGGATCGA 266
|||||||||||||||||||| |||||||||| ||||| ||||| || ||||||||||||
Sbjct 93400 TCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAA-TTCGAAAGATCTAAAGGATCGA 93458
Query 267 TAGGCCACACTTTCATGGTTTGTATTCA 294
||||||| |||||| |||||||||||
Sbjct 93459 TAGGCCATGCTTTCACAGTTTGTATTCA 93486
Score = 363 bits (402), Expect = 3e-98
Identities = 243/268 (91%), Gaps = 2/268 (1%)
Strand=Plus/Minus
Query 28 CGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCC 87
|| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 366025 CGTTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCC 365966
Query 88 CTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGC 147
|| |||||||||||||||||| || ||| || |||||| | ||||||||||||||
Sbjct 365965 CTGTTAGTGGGTGAACAATCCTACACTTGGTGACTTCTGCGACACAATGATAGGAAGAGC 365906
Query 148 CGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 207
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 365905 CGACATCGAAGAATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 365846
Query 208 TCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA-CTAAAGGATCGA 266
|||||||||||||||||||| |||||||||| ||||||| ||| || ||||||||||||
Sbjct 365845 TCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATT-CGAAAGATCTAAAGGATCGA 365787
Query 267 TAGGCCACACTTTCATGGTTTGTATTCA 294
||||||| |||||| |||||||||||
Sbjct 365786 TAGGCCATGCTTTCACAGTTTGTATTCA 365759
Score = 363 bits (402), Expect = 3e-98
Identities = 243/268 (91%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 28 CGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCC 87
|| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 595637 CGTTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCC 595696
Query 88 CTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGC 147
|| |||||||||||||||||| || ||| || |||||| | ||||||||||||||
Sbjct 595697 CTGTTAGTGGGTGAACAATCCTACACTTGGTGACTTCTGCGACACAATGATAGGAAGAGC 595756
Query 148 CGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 207
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 595757 CGACATCGAAGAATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 595816
Query 208 TCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA-CTAAAGGATCGA 266
|||||||||||||||||||| |||||||||| ||||| ||||| || ||||||||||||
Sbjct 595817 TCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAA-TTCGAAAGATCTAAAGGATCGA 595875
Query 267 TAGGCCACACTTTCATGGTTTGTATTCA 294
||||||| |||||| |||||||||||
Sbjct 595876 TAGGCCATGCTTTCACAGTTTGTATTCA 595903
Score = 363 bits (402), Expect = 3e-98
Identities = 243/268 (91%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 28 CGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCC 87
|| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 670590 CGTTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCC 670649
Query 88 CTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGC 147
|| |||||||||||||||||| || ||| || |||||| | ||||||||||||||
Sbjct 670650 CTGTTAGTGGGTGAACAATCCTACACTTGGTGACTTCTGCGACACAATGATAGGAAGAGC 670709
Query 148 CGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 207
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 670710 CGACATCGAAGAATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 670769
Query 208 TCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA-CTAAAGGATCGA 266
|||||||||||||||||||| |||||||||| ||||| ||||| || ||||||||||||
Sbjct 670770 TCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAA-TTCGAAAGATCTAAAGGATCGA 670828
Query 267 TAGGCCACACTTTCATGGTTTGTATTCA 294
||||||| |||||| |||||||||||
Sbjct 670829 TAGGCCATGCTTTCACAGTTTGTATTCA 670856
Score = 291 bits (322), Expect = 1e-76
Identities = 184/199 (92%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 28 CGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCC 87
|| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 741732 CGTTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCC 741791
Query 88 CTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGC 147
|| |||||||||||||||||| || ||| || |||||| | ||||||||||||||
Sbjct 741792 CTGTTAGTGGGTGAACAATCCTACACTTGGTGACTTCTGCGACACAATGATAGGAAGAGC 741851
Query 148 CGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 207
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741852 CGACATCGAAGAATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 741911
Query 208 TCCCTGTGGTAACTTTTCT 226
|||||||||||||||||||
Sbjct 741912 TCCCTGTGGTAACTTTTCT 741930
Score = 255 bits (282), Expect = 1e-65
Identities = 167/183 (91%), Gaps = 1/183 (1%)
Strand=Plus/Plus
Query 28 CGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCC 87
|| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 135865 CGTTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCC 135924
Query 88 CTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGC 147
|| |||||||||||||||||| || ||| || |||||| | ||||||||||||||
Sbjct 135925 CTGTTAGTGGGTGAACAATCCTACACTTGGTGACTTCTGCGACACAATGATAGGAAGAGC 135984
Query 148 CGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 207
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 135985 CGACATCGAAGAATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAG-TA 136043
Query 208 TCC 210
|||
Sbjct 136044 TCC 136046
Score = 223 bits (246), Expect = 6e-56
Identities = 146/161 (91%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 28 CGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCC 87
|| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 318320 CGTTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCC 318379
Query 88 CTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGC 147
|| |||||||||||||||||| || ||| || |||||| | ||||||||||||||
Sbjct 318380 CTGTTAGTGGGTGAACAATCCTACACTTGGTGACTTCTGCGACACAATGATAGGAAGAGC 318439
Query 148 CGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTT 188
||||||||||| |||||||||||||||||||||||||||||
Sbjct 318440 CGACATCGAAGAATCAAAAAGCAACGTCGCTATGAACGCTT 318480
Score = 163 bits (180), Expect = 5e-38
Identities = 111/125 (89%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 28 CGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCC 87
|| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 546860 CGTTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCC 546801
Query 88 CTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGC 147
|| |||||||||||||||||| || ||| || |||||| | ||||||||||||||
Sbjct 546800 CTGTTAGTGGGTGAACAATCCTACACTTGGTGACTTCTGCGACACAATGATAGGAAGAGC 546741
Query 148 CGACA 152
|||||
Sbjct 546740 CGACA 546736
>seq2
Length=3465789
Score = 363 bits (402), Expect = 3e-98
Identities = 243/268 (91%), Gaps = 2/268 (1%)
Strand=Plus/Minus
Query 28 CGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCC 87
|| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 3168261 CGTTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCC 3168202
Query 88 CTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGC 147
|| |||||||||||||||||| || ||| || |||||| | ||||||||||||||
Sbjct 3168201 CTGTTAGTGGGTGAACAATCCTACACTTGGTGACTTCTGCGACACAATGATAGGAAGAGC 3168142
Query 148 CGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 207
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3168141 CGACATCGAAGAATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 3168082
Query 208 TCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA-CTAAAGGATCGA 266
|||||||||||||||||||| |||||||||| ||||||| ||| || ||||||||||||
Sbjct 3168081 TCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATT-CGAAAGATCTAAAGGATCGA 3168023
Query 267 TAGGCCACACTTTCATGGTTTGTATTCA 294
||||||| |||||| |||||||||||
Sbjct 3168022 TAGGCCATGCTTTCACAGTTTGTATTCA 3167995
Score = 136 bits (150), Expect = 7e-30
Identities = 83/88 (94%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 28 CGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCC 87
|| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 3323122 CGTTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCC 3323181
Query 88 CTATTAGTGGGTGAACAATCCAACGCTT 115
|| |||||||||||||||||| || |||
Sbjct 3323182 CTGTTAGTGGGTGAACAATCCTACACTT 3323209
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854389875360
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