Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011-
02-15] 1,185 sequences; 56,660,572 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq11 264 2e-68
seq2 264 2e-68
>seq11
Length=1405779
Score = 264 bits (292), Expect = 2e-68
Identities = 215/258 (83%), Gaps = 2/258 (1%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
||||||||||||||| |||| | | |||| ||||| | | ||||||||||||||||||
Sbjct 97114 CTTCTTAGAGGGACTTTCGGTGACTAACCGAAGGAAGCTGGGGGCAATAACAGGTCTGTG 97055
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| |||||||||||||||||||||||| || | |||||||| ||||
Sbjct 97054 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGGCACACGCAACGAGTCTATCA 96995
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|||||| ||| ||| |||||||||| ||| || | || |||| | ||||| || |||
Sbjct 96994 CCTTGGTCGGCAGGCCTGGGTAATC-TGTGAACGTGTGCCGTGATTGGGATTGATTGTTG 96936
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||| | || | |||||||||| |||||||| |||| ||||||||| ||| ||||||
Sbjct 96935 CAATTTTCAATCATGAACGAGGAATTCCTAGTAAACGCGAGTCATCAGCTCGCATTGATT 96876
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 96875 ACGTCCCTGCCCTTTGTA 96858
Score = 264 bits (292), Expect = 2e-68
Identities = 215/258 (83%), Gaps = 2/258 (1%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
||||||||||||||| |||| | | |||| ||||| | | ||||||||||||||||||
Sbjct 139624 CTTCTTAGAGGGACTTTCGGTGACTAACCGAAGGAAGCTGGGGGCAATAACAGGTCTGTG 139565
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| |||||||||||||||||||||||| || | |||||||| ||||
Sbjct 139564 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGGCACACGCAACGAGTCTATCA 139505
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|||||| ||| ||| |||||||||| ||| || | || |||| | ||||| || |||
Sbjct 139504 CCTTGGTCGGCAGGCCTGGGTAATC-TGTGAACGTGTGCCGTGATTGGGATTGATTGTTG 139446
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||| | || | |||||||||| |||||||| |||| ||||||||| ||| ||||||
Sbjct 139445 CAATTTTCAATCATGAACGAGGAATTCCTAGTAAACGCGAGTCATCAGCTCGCATTGATT 139386
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 139385 ACGTCCCTGCCCTTTGTA 139368
Score = 264 bits (292), Expect = 2e-68
Identities = 215/258 (83%), Gaps = 2/258 (1%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
||||||||||||||| |||| | | |||| ||||| | | ||||||||||||||||||
Sbjct 322292 CTTCTTAGAGGGACTTTCGGTGACTAACCGAAGGAAGCTGGGGGCAATAACAGGTCTGTG 322233
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| |||||||||||||||||||||||| || | |||||||| ||||
Sbjct 322232 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGGCACACGCAACGAGTCTATCA 322173
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|||||| ||| ||| |||||||||| ||| || | || |||| | ||||| || |||
Sbjct 322172 CCTTGGTCGGCAGGCCTGGGTAATC-TGTGAACGTGTGCCGTGATTGGGATTGATTGTTG 322114
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||| | || | |||||||||| |||||||| |||| ||||||||| ||| ||||||
Sbjct 322113 CAATTTTCAATCATGAACGAGGAATTCCTAGTAAACGCGAGTCATCAGCTCGCATTGATT 322054
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 322053 ACGTCCCTGCCCTTTGTA 322036
Score = 264 bits (292), Expect = 2e-68
Identities = 215/258 (83%), Gaps = 2/258 (1%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
||||||||||||||| |||| | | |||| ||||| | | ||||||||||||||||||
Sbjct 362468 CTTCTTAGAGGGACTTTCGGTGACTAACCGAAGGAAGCTGGGGGCAATAACAGGTCTGTG 362527
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| |||||||||||||||||||||||| || | |||||||| ||||
Sbjct 362528 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGGCACACGCAACGAGTCTATCA 362587
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|||||| ||| ||| |||||||||| ||| || | || |||| | ||||| || |||
Sbjct 362588 CCTTGGTCGGCAGGCCTGGGTAATC-TGTGAACGTGTGCCGTGATTGGGATTGATTGTTG 362646
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||| | || | |||||||||| |||||||| |||| ||||||||| ||| ||||||
Sbjct 362647 CAATTTTCAATCATGAACGAGGAATTCCTAGTAAACGCGAGTCATCAGCTCGCATTGATT 362706
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 362707 ACGTCCCTGCCCTTTGTA 362724
Score = 264 bits (292), Expect = 2e-68
Identities = 215/258 (83%), Gaps = 2/258 (1%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
||||||||||||||| |||| | | |||| ||||| | | ||||||||||||||||||
Sbjct 544502 CTTCTTAGAGGGACTTTCGGTGACTAACCGAAGGAAGCTGGGGGCAATAACAGGTCTGTG 544561
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| |||||||||||||||||||||||| || | |||||||| ||||
Sbjct 544562 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGGCACACGCAACGAGTCTATCA 544621
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|||||| ||| ||| |||||||||| ||| || | || |||| | ||||| || |||
Sbjct 544622 CCTTGGTCGGCAGGCCTGGGTAATC-TGTGAACGTGTGCCGTGATTGGGATTGATTGTTG 544680
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||| | || | |||||||||| |||||||| |||| ||||||||| ||| ||||||
Sbjct 544681 CAATTTTCAATCATGAACGAGGAATTCCTAGTAAACGCGAGTCATCAGCTCGCATTGATT 544740
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 544741 ACGTCCCTGCCCTTTGTA 544758
Score = 264 bits (292), Expect = 2e-68
Identities = 215/258 (83%), Gaps = 2/258 (1%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
||||||||||||||| |||| | | |||| ||||| | | ||||||||||||||||||
Sbjct 599448 CTTCTTAGAGGGACTTTCGGTGACTAACCGAAGGAAGCTGGGGGCAATAACAGGTCTGTG 599389
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| |||||||||||||||||||||||| || | |||||||| ||||
Sbjct 599388 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGGCACACGCAACGAGTCTATCA 599329
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|||||| ||| ||| |||||||||| ||| || | || |||| | ||||| || |||
Sbjct 599328 CCTTGGTCGGCAGGCCTGGGTAATC-TGTGAACGTGTGCCGTGATTGGGATTGATTGTTG 599270
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||| | || | |||||||||| |||||||| |||| ||||||||| ||| ||||||
Sbjct 599269 CAATTTTCAATCATGAACGAGGAATTCCTAGTAAACGCGAGTCATCAGCTCGCATTGATT 599210
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 599209 ACGTCCCTGCCCTTTGTA 599192
>seq2
Length=3465789
Score = 264 bits (292), Expect = 2e-68
Identities = 215/258 (83%), Gaps = 2/258 (1%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
||||||||||||||| |||| | | |||| ||||| | | ||||||||||||||||||
Sbjct 3164570 CTTCTTAGAGGGACTTTCGGTGACTAACCGAAGGAAGCTGGGGGCAATAACAGGTCTGTG 3164629
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| |||||||||||||||||||||||| || | |||||||| ||||
Sbjct 3164630 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGGCACACGCAACGAGTCTATCA 3164689
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|||||| ||| ||| |||||||||| ||| || | || |||| | ||||| || |||
Sbjct 3164690 CCTTGGTCGGCAGGCCTGGGTAATC-TGTGAACGTGTGCCGTGATTGGGATTGATTGTTG 3164748
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||| | || | |||||||||| |||||||| |||| ||||||||| ||| ||||||
Sbjct 3164749 CAATTTTCAATCATGAACGAGGAATTCCTAGTAAACGCGAGTCATCAGCTCGCATTGATT 3164808
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 3164809 ACGTCCCTGCCCTTTGTA 3164826
Score = 264 bits (292), Expect = 2e-68
Identities = 215/258 (83%), Gaps = 2/258 (1%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
||||||||||||||| |||| | | |||| ||||| | | ||||||||||||||||||
Sbjct 3326197 CTTCTTAGAGGGACTTTCGGTGACTAACCGAAGGAAGCTGGGGGCAATAACAGGTCTGTG 3326138
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| |||||||||||||||||||||||| || | |||||||| ||||
Sbjct 3326137 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGGCACACGCAACGAGTCTATCA 3326078
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|||||| ||| ||| |||||||||| ||| || | || |||| | ||||| || |||
Sbjct 3326077 CCTTGGTCGGCAGGCCTGGGTAATC-TGTGAACGTGTGCCGTGATTGGGATTGATTGTTG 3326019
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||| | || | |||||||||| |||||||| |||| ||||||||| ||| ||||||
Sbjct 3326018 CAATTTTCAATCATGAACGAGGAATTCCTAGTAAACGCGAGTCATCAGCTCGCATTGATT 3325959
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 3325958 ACGTCCCTGCCCTTTGTA 3325941
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947188775680
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