Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureococcus_20anophagefferens_20[genbank_20GCA_5F000186865.1_202011- 02-15] 1,185 sequences; 56,660,572 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq11 264 2e-68 seq2 264 2e-68 >seq11 Length=1405779 Score = 264 bits (292), Expect = 2e-68 Identities = 215/258 (83%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||||| |||| | | |||| ||||| | | |||||||||||||||||| Sbjct 97114 CTTCTTAGAGGGACTTTCGGTGACTAACCGAAGGAAGCTGGGGGCAATAACAGGTCTGTG 97055 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| |||||||||||||||||||||||| || | |||||||| |||| Sbjct 97054 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGGCACACGCAACGAGTCTATCA 96995 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 |||||| ||| ||| |||||||||| ||| || | || |||| | ||||| || ||| Sbjct 96994 CCTTGGTCGGCAGGCCTGGGTAATC-TGTGAACGTGTGCCGTGATTGGGATTGATTGTTG 96936 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| | || | |||||||||| |||||||| |||| ||||||||| ||| |||||| Sbjct 96935 CAATTTTCAATCATGAACGAGGAATTCCTAGTAAACGCGAGTCATCAGCTCGCATTGATT 96876 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 96875 ACGTCCCTGCCCTTTGTA 96858 Score = 264 bits (292), Expect = 2e-68 Identities = 215/258 (83%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||||| |||| | | |||| ||||| | | |||||||||||||||||| Sbjct 139624 CTTCTTAGAGGGACTTTCGGTGACTAACCGAAGGAAGCTGGGGGCAATAACAGGTCTGTG 139565 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| |||||||||||||||||||||||| || | |||||||| |||| Sbjct 139564 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGGCACACGCAACGAGTCTATCA 139505 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 |||||| ||| ||| |||||||||| ||| || | || |||| | ||||| || ||| Sbjct 139504 CCTTGGTCGGCAGGCCTGGGTAATC-TGTGAACGTGTGCCGTGATTGGGATTGATTGTTG 139446 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| | || | |||||||||| |||||||| |||| ||||||||| ||| |||||| Sbjct 139445 CAATTTTCAATCATGAACGAGGAATTCCTAGTAAACGCGAGTCATCAGCTCGCATTGATT 139386 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 139385 ACGTCCCTGCCCTTTGTA 139368 Score = 264 bits (292), Expect = 2e-68 Identities = 215/258 (83%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||||| |||| | | |||| ||||| | | |||||||||||||||||| Sbjct 322292 CTTCTTAGAGGGACTTTCGGTGACTAACCGAAGGAAGCTGGGGGCAATAACAGGTCTGTG 322233 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| |||||||||||||||||||||||| || | |||||||| |||| Sbjct 322232 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGGCACACGCAACGAGTCTATCA 322173 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 |||||| ||| ||| |||||||||| ||| || | || |||| | ||||| || ||| Sbjct 322172 CCTTGGTCGGCAGGCCTGGGTAATC-TGTGAACGTGTGCCGTGATTGGGATTGATTGTTG 322114 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| | || | |||||||||| |||||||| |||| ||||||||| ||| |||||| Sbjct 322113 CAATTTTCAATCATGAACGAGGAATTCCTAGTAAACGCGAGTCATCAGCTCGCATTGATT 322054 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 322053 ACGTCCCTGCCCTTTGTA 322036 Score = 264 bits (292), Expect = 2e-68 Identities = 215/258 (83%), Gaps = 2/258 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||||| |||| | | |||| ||||| | | |||||||||||||||||| Sbjct 362468 CTTCTTAGAGGGACTTTCGGTGACTAACCGAAGGAAGCTGGGGGCAATAACAGGTCTGTG 362527 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| |||||||||||||||||||||||| || | |||||||| |||| Sbjct 362528 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGGCACACGCAACGAGTCTATCA 362587 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 |||||| ||| ||| |||||||||| ||| || | || |||| | ||||| || ||| Sbjct 362588 CCTTGGTCGGCAGGCCTGGGTAATC-TGTGAACGTGTGCCGTGATTGGGATTGATTGTTG 362646 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| | || | |||||||||| |||||||| |||| ||||||||| ||| |||||| Sbjct 362647 CAATTTTCAATCATGAACGAGGAATTCCTAGTAAACGCGAGTCATCAGCTCGCATTGATT 362706 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 362707 ACGTCCCTGCCCTTTGTA 362724 Score = 264 bits (292), Expect = 2e-68 Identities = 215/258 (83%), Gaps = 2/258 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||||| |||| | | |||| ||||| | | |||||||||||||||||| Sbjct 544502 CTTCTTAGAGGGACTTTCGGTGACTAACCGAAGGAAGCTGGGGGCAATAACAGGTCTGTG 544561 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| |||||||||||||||||||||||| || | |||||||| |||| Sbjct 544562 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGGCACACGCAACGAGTCTATCA 544621 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 |||||| ||| ||| |||||||||| ||| || | || |||| | ||||| || ||| Sbjct 544622 CCTTGGTCGGCAGGCCTGGGTAATC-TGTGAACGTGTGCCGTGATTGGGATTGATTGTTG 544680 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| | || | |||||||||| |||||||| |||| ||||||||| ||| |||||| Sbjct 544681 CAATTTTCAATCATGAACGAGGAATTCCTAGTAAACGCGAGTCATCAGCTCGCATTGATT 544740 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 544741 ACGTCCCTGCCCTTTGTA 544758 Score = 264 bits (292), Expect = 2e-68 Identities = 215/258 (83%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||||| |||| | | |||| ||||| | | |||||||||||||||||| Sbjct 599448 CTTCTTAGAGGGACTTTCGGTGACTAACCGAAGGAAGCTGGGGGCAATAACAGGTCTGTG 599389 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| |||||||||||||||||||||||| || | |||||||| |||| Sbjct 599388 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGGCACACGCAACGAGTCTATCA 599329 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 |||||| ||| ||| |||||||||| ||| || | || |||| | ||||| || ||| Sbjct 599328 CCTTGGTCGGCAGGCCTGGGTAATC-TGTGAACGTGTGCCGTGATTGGGATTGATTGTTG 599270 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| | || | |||||||||| |||||||| |||| ||||||||| ||| |||||| Sbjct 599269 CAATTTTCAATCATGAACGAGGAATTCCTAGTAAACGCGAGTCATCAGCTCGCATTGATT 599210 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 599209 ACGTCCCTGCCCTTTGTA 599192 >seq2 Length=3465789 Score = 264 bits (292), Expect = 2e-68 Identities = 215/258 (83%), Gaps = 2/258 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||||| |||| | | |||| ||||| | | |||||||||||||||||| Sbjct 3164570 CTTCTTAGAGGGACTTTCGGTGACTAACCGAAGGAAGCTGGGGGCAATAACAGGTCTGTG 3164629 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| |||||||||||||||||||||||| || | |||||||| |||| Sbjct 3164630 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGGCACACGCAACGAGTCTATCA 3164689 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 |||||| ||| ||| |||||||||| ||| || | || |||| | ||||| || ||| Sbjct 3164690 CCTTGGTCGGCAGGCCTGGGTAATC-TGTGAACGTGTGCCGTGATTGGGATTGATTGTTG 3164748 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| | || | |||||||||| |||||||| |||| ||||||||| ||| |||||| Sbjct 3164749 CAATTTTCAATCATGAACGAGGAATTCCTAGTAAACGCGAGTCATCAGCTCGCATTGATT 3164808 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 3164809 ACGTCCCTGCCCTTTGTA 3164826 Score = 264 bits (292), Expect = 2e-68 Identities = 215/258 (83%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||||| |||| | | |||| ||||| | | |||||||||||||||||| Sbjct 3326197 CTTCTTAGAGGGACTTTCGGTGACTAACCGAAGGAAGCTGGGGGCAATAACAGGTCTGTG 3326138 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| |||||||||||||||||||||||| || | |||||||| |||| Sbjct 3326137 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGGCACACGCAACGAGTCTATCA 3326078 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 |||||| ||| ||| |||||||||| ||| || | || |||| | ||||| || ||| Sbjct 3326077 CCTTGGTCGGCAGGCCTGGGTAATC-TGTGAACGTGTGCCGTGATTGGGATTGATTGTTG 3326019 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| | || | |||||||||| |||||||| |||| ||||||||| ||| |||||| Sbjct 3326018 CAATTTTCAATCATGAACGAGGAATTCCTAGTAAACGCGAGTCATCAGCTCGCATTGATT 3325959 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 3325958 ACGTCCCTGCCCTTTGTA 3325941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947188775680