Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastocystis_20hominis_20[genbank_20GCA_5F000151665.1_202010-07-06] 54 sequences; 18,817,245 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq54 78.8 5e-13 seq51 78.8 5e-13 seq44 78.8 5e-13 seq33 78.8 5e-13 seq31 78.8 5e-13 seq25 78.8 5e-13 seq21 78.8 5e-13 seq18 78.8 5e-13 seq15 78.8 5e-13 seq13 78.8 5e-13 seq11 78.8 5e-13 seq10 78.8 5e-13 seq9 78.8 5e-13 seq8 78.8 5e-13 seq4 78.8 5e-13 >seq54 Length=642864 Score = 78.8 bits (86), Expect = 5e-13 Identities = 88/117 (75%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||| | | || | | ||| |||| | Sbjct 538 GAACCCAAAGACTTTGATTTCTCATAAGGTACTAATAGACACCATTGGAT--CATCTACT 481 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||| || ||||| | ||||||||||| ||||||| ||| |||| || Sbjct 480 AACTCCTAGTCGGTATCGTTTATAGCTAAGACTACGAGGGTATCTAATCCTCTTTGA 424 Score = 78.8 bits (86), Expect = 5e-13 Identities = 88/117 (75%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||| | | || | | ||| |||| | Sbjct 635538 GAACCCAAAGACTTTGATTTCTCATAAGGTACTAATAGACACCATTGGAT--CATCTACT 635595 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||| || ||||| | ||||||||||| ||||||| ||| |||| || Sbjct 635596 AACTCCTAGTCGGTATCGTTTATAGCTAAGACTACGAGGGTATCTAATCCTCTTTGA 635652 >seq51 Length=900598 Score = 78.8 bits (86), Expect = 5e-13 Identities = 88/117 (75%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||| | | || | | ||| |||| | Sbjct 3066 GAACCCAAAGACTTTGATTTCTCATAAGGTACTAATAGACACCATTGGAT--CATCTACT 3009 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||| || ||||| | ||||||||||| ||||||| ||| |||| || Sbjct 3008 AACTCCTAGTCGGTATCGTTTATAGCTAAGACTACGAGGGTATCTAATCCTCTTTGA 2952 Score = 78.8 bits (86), Expect = 5e-13 Identities = 88/117 (75%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||| | | || | | ||| |||| | Sbjct 22936 GAACCCAAAGACTTTGATTTCTCATAAGGTACTAATAGACACCATTGGAT--CATCTACT 22879 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||| || ||||| | ||||||||||| ||||||| ||| |||| || Sbjct 22878 AACTCCTAGTCGGTATCGTTTATAGCTAAGACTACGAGGGTATCTAATCCTCTTTGA 22822 Score = 78.8 bits (86), Expect = 5e-13 Identities = 88/117 (75%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||| | | || | | ||| |||| | Sbjct 894421 GAACCCAAAGACTTTGATTTCTCATAAGGTACTAATAGACACCATTGGAT--CATCTACT 894478 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||| || ||||| | ||||||||||| ||||||| ||| |||| || Sbjct 894479 AACTCCTAGTCGGTATCGTTTATAGCTAAGACTACGAGGGTATCTAATCCTCTTTGA 894535 >seq44 Length=4698 Score = 78.8 bits (86), Expect = 5e-13 Identities = 88/117 (75%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||| | | || | | ||| |||| | Sbjct 1888 GAACCCAAAGACTTTGATTTCTCATAAGGTACTAATAGACACCATTGGAT--CATCTACT 1945 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||| || ||||| | ||||||||||| ||||||| ||| |||| || Sbjct 1946 AACTCCTAGTCGGTATCGTTTATAGCTAAGACTACGAGGGTATCTAATCCTCTTTGA 2002 >seq33 Length=10925 Score = 78.8 bits (86), Expect = 5e-13 Identities = 88/117 (75%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||| | | || | | ||| |||| | Sbjct 4505 GAACCCAAAGACTTTGATTTCTCATAAGGTACTAATAGACACCATTGGAT--CATCTACT 4562 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||| || ||||| | ||||||||||| ||||||| ||| |||| || Sbjct 4563 AACTCCTAGTCGGTATCGTTTATAGCTAAGACTACGAGGGTATCTAATCCTCTTTGA 4619 >seq31 Length=13026 Score = 78.8 bits (86), Expect = 5e-13 Identities = 88/117 (75%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||| | | || | | ||| |||| | Sbjct 6608 GAACCCAAAGACTTTGATTTCTCATAAGGTACTAATAGACACCATTGGAT--CATCTACT 6665 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||| || ||||| | ||||||||||| ||||||| ||| |||| || Sbjct 6666 AACTCCTAGTCGGTATCGTTTATAGCTAAGACTACGAGGGTATCTAATCCTCTTTGA 6722 >seq25 Length=75593 Score = 78.8 bits (86), Expect = 5e-13 Identities = 88/117 (75%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||| | | || | | ||| |||| | Sbjct 21145 GAACCCAAAGACTTTGATTTCTCATAAGGTACTAATAGACACCATTGGAT--CATCTACT 21088 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||| || ||||| | ||||||||||| ||||||| ||| |||| || Sbjct 21087 AACTCCTAGTCGGTATCGTTTATAGCTAAGACTACGAGGGTATCTAATCCTCTTTGA 21031 >seq21 Length=114758 Score = 78.8 bits (86), Expect = 5e-13 Identities = 88/117 (75%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||| | | || | | ||| |||| | Sbjct 3225 GAACCCAAAGACTTTGATTTCTCATAAGGTACTAATAGACACCATTGGAT--CATCTACT 3168 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||| || ||||| | ||||||||||| ||||||| ||| |||| || Sbjct 3167 AACTCCTAGTCGGTATCGTTTATAGCTAAGACTACGAGGGTATCTAATCCTCTTTGA 3111 >seq18 Length=222987 Score = 78.8 bits (86), Expect = 5e-13 Identities = 88/117 (75%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||| | | || | | ||| |||| | Sbjct 219058 GAACCCAAAGACTTTGATTTCTCATAAGGTACTAATAGACACCATTGGAT--CATCTACT 219115 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||| || ||||| | ||||||||||| ||||||| ||| |||| || Sbjct 219116 AACTCCTAGTCGGTATCGTTTATAGCTAAGACTACGAGGGTATCTAATCCTCTTTGA 219172 >seq15 Length=273635 Score = 78.8 bits (86), Expect = 5e-13 Identities = 88/117 (75%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||| | | || | | ||| |||| | Sbjct 11455 GAACCCAAAGACTTTGATTTCTCATAAGGTACTAATAGACACCATTGGAT--CATCTACT 11398 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||| || ||||| | ||||||||||| ||||||| ||| |||| || Sbjct 11397 AACTCCTAGTCGGTATCGTTTATAGCTAAGACTACGAGGGTATCTAATCCTCTTTGA 11341 >seq13 Length=1458350 Score = 78.8 bits (86), Expect = 5e-13 Identities = 88/117 (75%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||| | | || | | ||| |||| | Sbjct 687 GAACCCAAAGACTTTGATTTCTCATAAGGTACTAATAGACACCATTGGAT--CATCTACT 630 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||| || ||||| | ||||||||||| ||||||| ||| |||| || Sbjct 629 AACTCCTAGTCGGTATCGTTTATAGCTAAGACTACGAGGGTATCTAATCCTCTTTGA 573 Score = 78.8 bits (86), Expect = 5e-13 Identities = 88/117 (75%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||| | | || | | ||| |||| | Sbjct 13416 GAACCCAAAGACTTTGATTTCTCATAAGGTACTAATAGACACCATTGGAT--CATCTACT 13359 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||| || ||||| | ||||||||||| ||||||| ||| |||| || Sbjct 13358 AACTCCTAGTCGGTATCGTTTATAGCTAAGACTACGAGGGTATCTAATCCTCTTTGA 13302 >seq11 Length=370504 Score = 78.8 bits (86), Expect = 5e-13 Identities = 88/117 (75%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||| | | || | | ||| |||| | Sbjct 330645 GAACCCAAAGACTTTGATTTCTCATAAGGTACTAATAGACACCATTGGAT--CATCTACT 330702 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||| || ||||| | ||||||||||| ||||||| ||| |||| || Sbjct 330703 AACTCCTAGTCGGTATCGTTTATAGCTAAGACTACGAGGGTATCTAATCCTCTTTGA 330759 Score = 78.8 bits (86), Expect = 5e-13 Identities = 88/117 (75%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||| | | || | | ||| |||| | Sbjct 343715 GAACCCAAAGACTTTGATTTCTCATAAGGTACTAATAGACACCATTGGAT--CATCTACT 343772 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||| || ||||| | ||||||||||| ||||||| ||| |||| || Sbjct 343773 AACTCCTAGTCGGTATCGTTTATAGCTAAGACTACGAGGGTATCTAATCCTCTTTGA 343829 Score = 78.8 bits (86), Expect = 5e-13 Identities = 88/117 (75%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||| | | || | | ||| |||| | Sbjct 355596 GAACCCAAAGACTTTGATTTCTCATAAGGTACTAATAGACACCATTGGAT--CATCTACT 355653 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||| || ||||| | ||||||||||| ||||||| ||| |||| || Sbjct 355654 AACTCCTAGTCGGTATCGTTTATAGCTAAGACTACGAGGGTATCTAATCCTCTTTGA 355710 Score = 78.8 bits (86), Expect = 5e-13 Identities = 88/117 (75%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||| | | || | | ||| |||| | Sbjct 367610 GAACCCAAAGACTTTGATTTCTCATAAGGTACTAATAGACACCATTGGAT--CATCTACT 367667 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||| || ||||| | ||||||||||| ||||||| ||| |||| || Sbjct 367668 AACTCCTAGTCGGTATCGTTTATAGCTAAGACTACGAGGGTATCTAATCCTCTTTGA 367724 >seq10 Length=414243 Score = 78.8 bits (86), Expect = 5e-13 Identities = 88/117 (75%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||| | | || | | ||| |||| | Sbjct 406287 GAACCCAAAGACTTTGATTTCTCATAAGGTACTAATAGACACCATTGGAT--CATCTACT 406344 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||| || ||||| | ||||||||||| ||||||| ||| |||| || Sbjct 406345 AACTCCTAGTCGGTATCGTTTATAGCTAAGACTACGAGGGTATCTAATCCTCTTTGA 406401 >seq9 Length=433969 Score = 78.8 bits (86), Expect = 5e-13 Identities = 88/117 (75%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||| | | || | | ||| |||| | Sbjct 433308 GAACCCAAAGACTTTGATTTCTCATAAGGTACTAATAGACACCATTGGAT--CATCTACT 433365 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||| || ||||| | ||||||||||| ||||||| ||| |||| || Sbjct 433366 AACTCCTAGTCGGTATCGTTTATAGCTAAGACTACGAGGGTATCTAATCCTCTTTGA 433422 >seq8 Length=440611 Score = 78.8 bits (86), Expect = 5e-13 Identities = 88/117 (75%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||| | | || | | ||| |||| | Sbjct 429346 GAACCCAAAGACTTTGATTTCTCATAAGGTACTAATAGACACCATTGGAT--CATCTACT 429403 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||| || ||||| | ||||||||||| ||||||| ||| |||| || Sbjct 429404 AACTCCTAGTCGGTATCGTTTATAGCTAAGACTACGAGGGTATCTAATCCTCTTTGA 429460 >seq4 Length=591523 Score = 78.8 bits (86), Expect = 5e-13 Identities = 88/117 (75%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||| | | || | | ||| |||| | Sbjct 2966 GAACCCAAAGACTTTGATTTCTCATAAGGTACTAATAGACACCATTGGAT--CATCTACT 2909 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||| || ||||| | ||||||||||| ||||||| ||| |||| || Sbjct 2908 AACTCCTAGTCGGTATCGTTTATAGCTAAGACTACGAGGGTATCTAATCCTCTTTGA 2852 Score = 78.8 bits (86), Expect = 5e-13 Identities = 88/117 (75%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||| | | || | | ||| |||| | Sbjct 589477 GAACCCAAAGACTTTGATTTCTCATAAGGTACTAATAGACACCATTGGAT--CATCTACT 589534 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||| || ||||| | ||||||||||| ||||||| ||| |||| || Sbjct 589535 AACTCCTAGTCGGTATCGTTTATAGCTAAGACTACGAGGGTATCTAATCCTCTTTGA 589591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399859060