Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastocystis_20hominis_20[genbank_20GCA_5F000151665.1_202010-07-06] 54 sequences; 18,817,245 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq27 129 1e-27 >seq27 Length=29948 Score = 129 bits (142), Expect = 1e-27 Identities = 193/270 (71%), Gaps = 13/270 (5%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| ||| |||||||| ||| || || ||||||||| || ||||| Sbjct 9872 GCATCTTCACGAATATTTCAATTTCATAAAGTTCATAGTGGAGACAGTGGGGAAGTCGTT 9931 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 || || ||| ||| ||| | ||| ||||||||||||||||||||||||||| | | Sbjct 9932 ACACCATTCATGCACGTCAATAATTAGTTGACAAGGAATTTCGCTACCTTAGGACCATCA 9991 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTT--CACTGCTTCGATTGCTCTAACAGAT 184 ||||| |||||||| |||||| |||| || | ||| || | ||| || Sbjct 9992 GAGTTATGGCCGCCGATTACTGTTACTTATATTAAAAAAAATTC--TT--TTTAA---AT 10044 Query 185 CCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGC 244 || | | ||| || |||||| ||||| | |||||||| |||| ||| ||||| Sbjct 10045 ----TTTGCAATACAGTTCCTGGCAGGTGTCAGACCTTATACATCATCTTACGATTTAGC 10100 Query 245 AGAAACCTGTGTTTTTGGTAAACAGTCGCT 274 | | ||||||||||| |||||||||||| Sbjct 10101 AAAGTCCTGTGTTTTTATTAAACAGTCGCT 10130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062399426304