Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastocystis_20hominis_20[genbank_20GCA_5F000151665.1_202010-07-06] 54 sequences; 18,817,245 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq27 82.4 8e-14 >seq27 Length=29948 Score = 82.4 bits (90), Expect = 8e-14 Identities = 104/147 (71%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| | | |||| |||||||||| ||| | |||||||| Sbjct 9841 CGGGGTCTTTCCGTCTAACCATATATAATTCGCATCTTCACGAATATTTCAATTTCATAA 9900 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || ||| || ||||||| |||||||||| |||| ||| | ||| Sbjct 9901 AGTTCATAGTGGAGACAGTGGGGAAGTCGTTACACCATTCATGCACGTCAATAATTAGTT 9960 Query 143 GACAAGGAATTTCGCTACCTTAGGACC 169 ||||||||||||||||||||||||||| Sbjct 9961 GACAAGGAATTTCGCTACCTTAGGACC 9987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547199713746