Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastocystis_20hominis_20[genbank_20GCA_5F000151665.1_202010-07-06] 54 sequences; 18,817,245 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq27 95.1 3e-17 >seq27 Length=29948 Score = 95.1 bits (104), Expect = 3e-17 Identities = 114/154 (74%), Gaps = 1/154 (1%) Strand=Plus/Plus Query 41 GCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCT 100 ||||||||| |||||| |||||||||||||||||||||||| || | | |||| Sbjct 13088 GCTGGATCAAACTTTCGTTTATTGTCCAATATTCCCCACTGCTGACT-CATAAAGAGTTC 13146 Query 101 GGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGC 160 || | | | ||| | || |||| ||||||| ||| || |||| || ||| | | Sbjct 13147 GGGCTTTATTTCAATCCCGATGTGGTTGATCATTCTCACAAACCAACTAAAAATCTTTGG 13206 Query 161 CTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 |||||| ||| |||||| |||||||| |||||| Sbjct 13207 CTTGGTAAGCTTTTACCTTACCAACTACCTAATC 13240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071999421120