Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastocystis_20hominis_20[genbank_20GCA_5F000151665.1_202010-07-06] 54 sequences; 18,817,245 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq27 78.8 2e-12 >seq27 Length=29948 Score = 78.8 bits (86), Expect = 2e-12 Identities = 136/193 (70%), Gaps = 15/193 (8%) Strand=Plus/Plus Query 211 CCATTATACAAAAGGTACGCAGTCACCC---AACAAAGTGGGCTCCCACTGCTTGTACGC 267 |||||||||||||||||| ||||| || |||| |||| | || || | || Sbjct 11179 CCATTATACAAAAGGTACATTGTCACTTTTTAAAAAAG----CTCCAATTG-TTAAAAGC 11233 Query 268 ATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT-TTTCGCCTTTCCCTCAC 326 || | ||||| | ||||||||| | | | |||| |||| ||||||| | || Sbjct 11234 ATTAGATTTCAAGTTCTATTTCAATTTCGTAAA-----TTCTATTTCACCTTTCCTTTAC 11288 Query 327 GGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATA 386 ||||||||||||||||| | | | | || ||||||| ||| ||| |||| ||| || Sbjct 11289 AGTACTAGTTCACTATCGATTATTTATTA-TATTTAGGCTTAAAGGGTGGTTCCCTTGTA 11347 Query 387 TTCAGACAAAGTT 399 |||| ||||| || Sbjct 11348 TTCAAACAAAATT 11360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241599329536