Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastocystis_20hominis_20[genbank_20GCA_5F000151665.1_202010-07-06] 54 sequences; 18,817,245 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq27 77.0 6e-12 >seq27 Length=29948 Score = 77.0 bits (84), Expect = 6e-12 Identities = 98/134 (73%), Gaps = 1/134 (1%) Strand=Plus/Plus Query 27 ATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAA 86 ||||| |||||| ||||||||||| ||| || ||| |||| | | ||| |||| | Sbjct 13108 ATTGTCCAATATTCCCCACTGCTGACTCATAAAG-AGTTCGGGCTTTATTTCAATCCCGA 13166 Query 87 TGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATCTCA 146 ||||| | ||| ||| || || ||| ||| | |||||||| ||| ||| || | Sbjct 13167 TGTGGTTGATCATTCTCACAAACCAACTAAAAATCTTTGGCTTGGTAAGCTTTTACCTTA 13226 Query 147 CCAACTACCTAATC 160 |||||||||||||| Sbjct 13227 CCAACTACCTAATC 13240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998399460864