Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastocystis_20hominis_20[genbank_20GCA_5F000151665.1_202010-07-06] 54 sequences; 18,817,245 total letters Query= AAMG01001674.1 Length=313 Score E Sequences producing significant alignments: (Bits) Value seq52 80.6 5e-13 >seq52 Length=870417 Score = 80.6 bits (88), Expect = 5e-13 Identities = 98/134 (73%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 42 AGATTGTCCAGCGTATTGCTGGCCGTCGCGTACAAGAAGCCTCGGGCCGCGTGTACCACA 101 || |||| |||||||| | || |||||||| || || |||||| |||||||| Sbjct 493434 AGCTTGTGGAGCGTATTTCGGGTCGTCGCGTGCACCCTGCTAGCGGCCGCTCGTACCACA 493375 Query 102 CCGTCTACAATCCGCCAAAGGTTGCAGGCAAGGACGATGTGACCGGCGAAGACCTGGTAC 161 ||| | ||| || || |||| | |||||||| |||||||| || || ||| | | Sbjct 493374 TCGTGTTCAACCCCCCCAAGGAGGAGGGCAAGGATGATGTGACTGGTGAGCCTCTGATTC 493315 Query 162 AGCGCAAGGACGAC 175 |||||||||||||| Sbjct 493314 AGCGCAAGGACGAC 493301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899199514432