Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastocystis_20hominis_20[genbank_20GCA_5F000151665.1_202010-07-06] 54 sequences; 18,817,245 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq51 82.4 8e-14 seq8 82.4 8e-14 >seq51 Length=900598 Score = 82.4 bits (90), Expect = 8e-14 Identities = 128/181 (71%), Gaps = 8/181 (4%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT--GCTCGAATACATTACCATG 70 |||||| ||| |||||||||| ||| ||||| | | || | | ||||| |||| |||| Sbjct 2708 TTTACTGTGAGAAAATTAGAGTGTTTAAAGCGGACTGTTCAGTTTGAATAGATTAGCATG 2767 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTT-TCTAGGACCGCCCGTAATGA 129 |||||||| ||| || | || ||||| | | || | || || || | || Sbjct 2768 GAATAATAAAATTGGCTTTCATAGTCGATTTTTTGGTTTGTTTATGAAAGC-----AAGA 2822 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | |||| ||| ||| |||||| | |||||||| | | |||||||||||| |||||| Sbjct 2823 TTAATAGGGACAGTTGGGGGTATTCATATTCAATAGCTAGAGGTGAAATTCTATGATTTA 2882 Query 190 T 190 | Sbjct 2883 T 2883 >seq8 Length=440611 Score = 82.4 bits (90), Expect = 8e-14 Identities = 128/181 (71%), Gaps = 8/181 (4%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT--GCTCGAATACATTACCATG 70 |||||| ||| |||||||||| ||| ||||| | | || | | ||||| |||| |||| Sbjct 429704 TTTACTGTGAGAAAATTAGAGTGTTTAAAGCGGACTGTTCAGTTTGAATAGATTAGCATG 429645 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTT-TCTAGGACCGCCCGTAATGA 129 |||||||| ||| || | || ||||| | | || | || || || | || Sbjct 429644 GAATAATAAAATTGGCTTTCATAGTCGATTTTTTGGTTTGTTTATGAAAGC-----AAGA 429590 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | |||| ||| ||| |||||| | |||||||| | | |||||||||||| |||||| Sbjct 429589 TTAATAGGGACAGTTGGGGGTATTCATATTCAATAGCTAGAGGTGAAATTCTATGATTTA 429530 Query 190 T 190 | Sbjct 429529 T 429529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511999732160