Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastocystis_20hominis_20[genbank_20GCA_5F000151665.1_202010-07-06] 54 sequences; 18,817,245 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq27 75.2 3e-11 >seq27 Length=29948 Score = 75.2 bits (82), Expect = 3e-11 Identities = 132/191 (69%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 |||||||| || |||||| ||| | | | || |||| |||| ||| || ||| Sbjct 13051 TTTACAACGATAAAGCCTTCATCACTTATGTAGTATTGCTGGATCAAACTTTCGTTTATT 13110 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 || |||||||||||||||||| || | | |||| || | | | ||| | || ||| Sbjct 13111 GTCCAATATTCCCCACTGCTGACT-CATAAAGAGTTCGGGCTTTATTTCAATCCCGATGT 13169 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 || || |||| ||| || |||| ||| ||| | | || ||| || ||||| ||| Sbjct 13170 GGTTGATCATTCTCACAAACCAACTAAAAATCTTTGGCTTGGTAAGCTTTTACCTTACCA 13229 Query 185 ACTAGCTAATC 195 |||| |||||| Sbjct 13230 ACTACCTAATC 13240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222399339904