Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastocystis_20hominis_20[genbank_20GCA_5F000151665.1_202010-07-06]
54 sequences; 18,817,245 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq54 183 6e-44
seq52 183 6e-44
seq51 183 6e-44
seq47 183 6e-44
seq44 183 6e-44
seq33 183 6e-44
seq31 183 6e-44
seq25 183 6e-44
seq22 183 6e-44
seq21 183 6e-44
seq15 183 6e-44
seq13 183 6e-44
seq11 183 6e-44
seq10 183 6e-44
seq9 183 6e-44
seq8 183 6e-44
seq4 183 6e-44
seq2 183 6e-44
seq1 183 6e-44
seq18 176 9e-42
seq35 104 4e-20
>seq54
Length=642864
Score = 183 bits (202), Expect = 6e-44
Identities = 176/226 (78%), Gaps = 5/226 (2%)
Strand=Plus/Plus
Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162
||||| | || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 852 GGAAGCTGGAAGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGC 911
Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222
||||||| | |||||||| | || | || || |||| |||||| | ||
Sbjct 912 GACACTGAACTATTCAACGAGT-----ATCTGAGTCGATAGACTTGGGAAATCTTTTGAA 966
Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282
| | ||||| ||||||| || ||| |||| || || | |||||||||| ||||||
Sbjct 967 AATAGTTCGTGATGGGGATTGATGCTTGTAATTTTTCATCATGAACGAGGAATTCCTAGT 1026
Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| || ||||||| | |||||||||||||||||||||||||||
Sbjct 1027 AAATGCAAGTCATCAACTTGCGTTGATTACGTCCCTGCCCTTTGTA 1072
Score = 183 bits (202), Expect = 6e-44
Identities = 176/226 (78%), Gaps = 5/226 (2%)
Strand=Plus/Minus
Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162
||||| | || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 635224 GGAAGCTGGAAGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGC 635165
Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222
||||||| | |||||||| | || | || || |||| |||||| | ||
Sbjct 635164 GACACTGAACTATTCAACGAGT-----ATCTGAGTCGATAGACTTGGGAAATCTTTTGAA 635110
Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282
| | ||||| ||||||| || ||| |||| || || | |||||||||| ||||||
Sbjct 635109 AATAGTTCGTGATGGGGATTGATGCTTGTAATTTTTCATCATGAACGAGGAATTCCTAGT 635050
Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| || ||||||| | |||||||||||||||||||||||||||
Sbjct 635049 AAATGCAAGTCATCAACTTGCGTTGATTACGTCCCTGCCCTTTGTA 635004
>seq52
Length=870417
Score = 183 bits (202), Expect = 6e-44
Identities = 176/226 (78%), Gaps = 5/226 (2%)
Strand=Plus/Minus
Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162
||||| | || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 869869 GGAAGCTGGAAGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGC 869810
Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222
||||||| | |||||||| | || | || || |||| |||||| | ||
Sbjct 869809 GACACTGAACTATTCAACGAGT-----ATCTGAGTCGATAGACTTGGGAAATCTTTTGAA 869755
Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282
| | ||||| ||||||| || ||| |||| || || | |||||||||| ||||||
Sbjct 869754 AATAGTTCGTGATGGGGATTGATGCTTGTAATTTTTCATCATGAACGAGGAATTCCTAGT 869695
Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| || ||||||| | |||||||||||||||||||||||||||
Sbjct 869694 AAATGCAAGTCATCAACTTGCGTTGATTACGTCCCTGCCCTTTGTA 869649
>seq51
Length=900598
Score = 183 bits (202), Expect = 6e-44
Identities = 176/226 (78%), Gaps = 5/226 (2%)
Strand=Plus/Plus
Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162
||||| | || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 3379 GGAAGCTGGAAGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGC 3438
Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222
||||||| | |||||||| | || | || || |||| |||||| | ||
Sbjct 3439 GACACTGAACTATTCAACGAGT-----ATCTGAGTCGATAGACTTGGGAAATCTTTTGAA 3493
Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282
| | ||||| ||||||| || ||| |||| || || | |||||||||| ||||||
Sbjct 3494 AATAGTTCGTGATGGGGATTGATGCTTGTAATTTTTCATCATGAACGAGGAATTCCTAGT 3553
Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| || ||||||| | |||||||||||||||||||||||||||
Sbjct 3554 AAATGCAAGTCATCAACTTGCGTTGATTACGTCCCTGCCCTTTGTA 3599
Score = 183 bits (202), Expect = 6e-44
Identities = 176/226 (78%), Gaps = 5/226 (2%)
Strand=Plus/Plus
Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162
||||| | || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 23249 GGAAGCTGGAAGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGC 23308
Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222
||||||| | |||||||| | || | || || |||| |||||| | ||
Sbjct 23309 GACACTGAACTATTCAACGAGT-----ATCTGAGTCGATAGACTTGGGAAATCTTTTGAA 23363
Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282
| | ||||| ||||||| || ||| |||| || || | |||||||||| ||||||
Sbjct 23364 AATAGTTCGTGATGGGGATTGATGCTTGTAATTTTTCATCATGAACGAGGAATTCCTAGT 23423
Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| || ||||||| | |||||||||||||||||||||||||||
Sbjct 23424 AAATGCAAGTCATCAACTTGCGTTGATTACGTCCCTGCCCTTTGTA 23469
Score = 183 bits (202), Expect = 6e-44
Identities = 176/226 (78%), Gaps = 5/226 (2%)
Strand=Plus/Minus
Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162
||||| | || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 894108 GGAAGCTGGAAGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGC 894049
Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222
||||||| | |||||||| | || | || || |||| |||||| | ||
Sbjct 894048 GACACTGAACTATTCAACGAGT-----ATCTGAGTCGATAGACTTGGGAAATCTTTTGAA 893994
Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282
| | ||||| ||||||| || ||| |||| || || | |||||||||| ||||||
Sbjct 893993 AATAGTTCGTGATGGGGATTGATGCTTGTAATTTTTCATCATGAACGAGGAATTCCTAGT 893934
Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| || ||||||| | |||||||||||||||||||||||||||
Sbjct 893933 AAATGCAAGTCATCAACTTGCGTTGATTACGTCCCTGCCCTTTGTA 893888
>seq47
Length=3877
Score = 183 bits (202), Expect = 6e-44
Identities = 176/226 (78%), Gaps = 5/226 (2%)
Strand=Plus/Plus
Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162
||||| | || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 335 GGAAGCTGGAAGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGC 394
Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222
||||||| | |||||||| | || | || || |||| |||||| | ||
Sbjct 395 GACACTGAACTATTCAACGAGT-----ATCTGAGTCGATAGACTTGGGAAATCTTTTGAA 449
Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282
| | ||||| ||||||| || ||| |||| || || | |||||||||| ||||||
Sbjct 450 AATAGTTCGTGATGGGGATTGATGCTTGTAATTTTTCATCATGAACGAGGAATTCCTAGT 509
Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| || ||||||| | |||||||||||||||||||||||||||
Sbjct 510 AAATGCAAGTCATCAACTTGCGTTGATTACGTCCCTGCCCTTTGTA 555
>seq44
Length=4698
Score = 183 bits (202), Expect = 6e-44
Identities = 176/226 (78%), Gaps = 5/226 (2%)
Strand=Plus/Minus
Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162
||||| | || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1573 GGAAGCTGGAAGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGC 1514
Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222
||||||| | |||||||| | || | || || |||| |||||| | ||
Sbjct 1513 GACACTGAACTATTCAACGAGT-----ATCTGAGTCGATAGACTTGGGAAATCTTTTGAA 1459
Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282
| | ||||| ||||||| || ||| |||| || || | |||||||||| ||||||
Sbjct 1458 AATAGTTCGTGATGGGGATTGATGCTTGTAATTTTTCATCATGAACGAGGAATTCCTAGT 1399
Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| || ||||||| | |||||||||||||||||||||||||||
Sbjct 1398 AAATGCAAGTCATCAACTTGCGTTGATTACGTCCCTGCCCTTTGTA 1353
>seq33
Length=10925
Score = 183 bits (202), Expect = 6e-44
Identities = 176/226 (78%), Gaps = 5/226 (2%)
Strand=Plus/Minus
Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162
||||| | || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 4190 GGAAGCTGGAAGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGC 4131
Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222
||||||| | |||||||| | || | || || |||| |||||| | ||
Sbjct 4130 GACACTGAACTATTCAACGAGT-----ATCTGAGTCGATAGACTTGGGAAATCTTTTGAA 4076
Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282
| | ||||| ||||||| || ||| |||| || || | |||||||||| ||||||
Sbjct 4075 AATAGTTCGTGATGGGGATTGATGCTTGTAATTTTTCATCATGAACGAGGAATTCCTAGT 4016
Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| || ||||||| | |||||||||||||||||||||||||||
Sbjct 4015 AAATGCAAGTCATCAACTTGCGTTGATTACGTCCCTGCCCTTTGTA 3970
>seq31
Length=13026
Score = 183 bits (202), Expect = 6e-44
Identities = 176/226 (78%), Gaps = 5/226 (2%)
Strand=Plus/Minus
Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162
||||| | || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 6289 GGAAGCTGGAAGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGC 6230
Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222
||||||| | |||||||| | || | || || |||| |||||| | ||
Sbjct 6229 GACACTGAACTATTCAACGAGT-----ATCTGAGTCGATAGACTTGGGAAATCTTTTGAA 6175
Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282
| | ||||| ||||||| || ||| |||| || || | |||||||||| ||||||
Sbjct 6174 AATAGTTCGTGATGGGGATTGATGCTTGTAATTTTTCATCATGAACGAGGAATTCCTAGT 6115
Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| || ||||||| | |||||||||||||||||||||||||||
Sbjct 6114 AAATGCAAGTCATCAACTTGCGTTGATTACGTCCCTGCCCTTTGTA 6069
>seq25
Length=75593
Score = 183 bits (202), Expect = 6e-44
Identities = 176/226 (78%), Gaps = 5/226 (2%)
Strand=Plus/Plus
Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162
||||| | || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 21458 GGAAGCTGGAAGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGC 21517
Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222
||||||| | |||||||| | || | || || |||| |||||| | ||
Sbjct 21518 GACACTGAACTATTCAACGAGT-----ATCTGAGTCGATAGACTTGGGAAATCTTTTGAA 21572
Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282
| | ||||| ||||||| || ||| |||| || || | |||||||||| ||||||
Sbjct 21573 AATAGTTCGTGATGGGGATTGATGCTTGTAATTTTTCATCATGAACGAGGAATTCCTAGT 21632
Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| || ||||||| | |||||||||||||||||||||||||||
Sbjct 21633 AAATGCAAGTCATCAACTTGCGTTGATTACGTCCCTGCCCTTTGTA 21678
>seq22
Length=102679
Score = 183 bits (202), Expect = 6e-44
Identities = 176/226 (78%), Gaps = 5/226 (2%)
Strand=Plus/Plus
Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162
||||| | || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 276 GGAAGCTGGAAGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGC 335
Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222
||||||| | |||||||| | || | || || |||| |||||| | ||
Sbjct 336 GACACTGAACTATTCAACGAGT-----ATCTGAGTCGATAGACTTGGGAAATCTTTTGAA 390
Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282
| | ||||| ||||||| || ||| |||| || || | |||||||||| ||||||
Sbjct 391 AATAGTTCGTGATGGGGATTGATGCTTGTAATTTTTCATCATGAACGAGGAATTCCTAGT 450
Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| || ||||||| | |||||||||||||||||||||||||||
Sbjct 451 AAATGCAAGTCATCAACTTGCGTTGATTACGTCCCTGCCCTTTGTA 496
>seq21
Length=114758
Score = 183 bits (202), Expect = 6e-44
Identities = 176/226 (78%), Gaps = 5/226 (2%)
Strand=Plus/Plus
Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162
||||| | || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 3538 GGAAGCTGGAAGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGC 3597
Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222
||||||| | |||||||| | || | || || |||| |||||| | ||
Sbjct 3598 GACACTGAACTATTCAACGAGT-----ATCTGAGTCGATAGACTTGGGAAATCTTTTGAA 3652
Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282
| | ||||| ||||||| || ||| |||| || || | |||||||||| ||||||
Sbjct 3653 AATAGTTCGTGATGGGGATTGATGCTTGTAATTTTTCATCATGAACGAGGAATTCCTAGT 3712
Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| || ||||||| | |||||||||||||||||||||||||||
Sbjct 3713 AAATGCAAGTCATCAACTTGCGTTGATTACGTCCCTGCCCTTTGTA 3758
>seq15
Length=273635
Score = 183 bits (202), Expect = 6e-44
Identities = 176/226 (78%), Gaps = 5/226 (2%)
Strand=Plus/Plus
Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162
||||| | || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 11765 GGAAGCTGGAAGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGC 11824
Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222
||||||| | |||||||| | || | || || |||| |||||| | ||
Sbjct 11825 GACACTGAACTATTCAACGAGT-----ATCTGAGTCGATAGACTTGGGAAATCTTTTGAA 11879
Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282
| | ||||| ||||||| || ||| |||| || || | |||||||||| ||||||
Sbjct 11880 AATAGTTCGTGATGGGGATTGATGCTTGTAATTTTTCATCATGAACGAGGAATTCCTAGT 11939
Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| || ||||||| | |||||||||||||||||||||||||||
Sbjct 11940 AAATGCAAGTCATCAACTTGCGTTGATTACGTCCCTGCCCTTTGTA 11985
>seq13
Length=1458350
Score = 183 bits (202), Expect = 6e-44
Identities = 176/226 (78%), Gaps = 5/226 (2%)
Strand=Plus/Plus
Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162
||||| | || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 997 GGAAGCTGGAAGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGC 1056
Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222
||||||| | |||||||| | || | || || |||| |||||| | ||
Sbjct 1057 GACACTGAACTATTCAACGAGT-----ATCTGAGTCGATAGACTTGGGAAATCTTTTGAA 1111
Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282
| | ||||| ||||||| || ||| |||| || || | |||||||||| ||||||
Sbjct 1112 AATAGTTCGTGATGGGGATTGATGCTTGTAATTTTTCATCATGAACGAGGAATTCCTAGT 1171
Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| || ||||||| | |||||||||||||||||||||||||||
Sbjct 1172 AAATGCAAGTCATCAACTTGCGTTGATTACGTCCCTGCCCTTTGTA 1217
Score = 183 bits (202), Expect = 6e-44
Identities = 176/226 (78%), Gaps = 5/226 (2%)
Strand=Plus/Plus
Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162
||||| | || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 13729 GGAAGCTGGAAGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGC 13788
Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222
||||||| | |||||||| | || | || || |||| |||||| | ||
Sbjct 13789 GACACTGAACTATTCAACGAGT-----ATCTGAGTCGATAGACTTGGGAAATCTTTTGAA 13843
Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282
| | ||||| ||||||| || ||| |||| || || | |||||||||| ||||||
Sbjct 13844 AATAGTTCGTGATGGGGATTGATGCTTGTAATTTTTCATCATGAACGAGGAATTCCTAGT 13903
Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| || ||||||| | |||||||||||||||||||||||||||
Sbjct 13904 AAATGCAAGTCATCAACTTGCGTTGATTACGTCCCTGCCCTTTGTA 13949
>seq11
Length=370504
Score = 183 bits (202), Expect = 6e-44
Identities = 176/226 (78%), Gaps = 5/226 (2%)
Strand=Plus/Minus
Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162
||||| | || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 330326 GGAAGCTGGAAGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGC 330267
Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222
||||||| | |||||||| | || | || || |||| |||||| | ||
Sbjct 330266 GACACTGAACTATTCAACGAGT-----ATCTGAGTCGATAGACTTGGGAAATCTTTTGAA 330212
Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282
| | ||||| ||||||| || ||| |||| || || | |||||||||| ||||||
Sbjct 330211 AATAGTTCGTGATGGGGATTGATGCTTGTAATTTTTCATCATGAACGAGGAATTCCTAGT 330152
Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| || ||||||| | |||||||||||||||||||||||||||
Sbjct 330151 AAATGCAAGTCATCAACTTGCGTTGATTACGTCCCTGCCCTTTGTA 330106
Score = 183 bits (202), Expect = 6e-44
Identities = 176/226 (78%), Gaps = 5/226 (2%)
Strand=Plus/Minus
Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162
||||| | || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 343401 GGAAGCTGGAAGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGC 343342
Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222
||||||| | |||||||| | || | || || |||| |||||| | ||
Sbjct 343341 GACACTGAACTATTCAACGAGT-----ATCTGAGTCGATAGACTTGGGAAATCTTTTGAA 343287
Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282
| | ||||| ||||||| || ||| |||| || || | |||||||||| ||||||
Sbjct 343286 AATAGTTCGTGATGGGGATTGATGCTTGTAATTTTTCATCATGAACGAGGAATTCCTAGT 343227
Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| || ||||||| | |||||||||||||||||||||||||||
Sbjct 343226 AAATGCAAGTCATCAACTTGCGTTGATTACGTCCCTGCCCTTTGTA 343181
Score = 183 bits (202), Expect = 6e-44
Identities = 176/226 (78%), Gaps = 5/226 (2%)
Strand=Plus/Minus
Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162
||||| | || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 355283 GGAAGCTGGAAGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGC 355224
Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222
||||||| | |||||||| | || | || || |||| |||||| | ||
Sbjct 355223 GACACTGAACTATTCAACGAGT-----ATCTGAGTCGATAGACTTGGGAAATCTTTTGAA 355169
Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282
| | ||||| ||||||| || ||| |||| || || | |||||||||| ||||||
Sbjct 355168 AATAGTTCGTGATGGGGATTGATGCTTGTAATTTTTCATCATGAACGAGGAATTCCTAGT 355109
Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| || ||||||| | |||||||||||||||||||||||||||
Sbjct 355108 AAATGCAAGTCATCAACTTGCGTTGATTACGTCCCTGCCCTTTGTA 355063
Score = 183 bits (202), Expect = 6e-44
Identities = 176/226 (78%), Gaps = 5/226 (2%)
Strand=Plus/Minus
Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162
||||| | || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 367293 GGAAGCTGGAAGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGC 367234
Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222
||||||| | |||||||| | || | || || |||| |||||| | ||
Sbjct 367233 GACACTGAACTATTCAACGAGT-----ATCTGAGTCGATAGACTTGGGAAATCTTTTGAA 367179
Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282
| | ||||| ||||||| || ||| |||| || || | |||||||||| ||||||
Sbjct 367178 AATAGTTCGTGATGGGGATTGATGCTTGTAATTTTTCATCATGAACGAGGAATTCCTAGT 367119
Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| || ||||||| | |||||||||||||||||||||||||||
Sbjct 367118 AAATGCAAGTCATCAACTTGCGTTGATTACGTCCCTGCCCTTTGTA 367073
>seq10
Length=414243
Score = 183 bits (202), Expect = 6e-44
Identities = 176/226 (78%), Gaps = 5/226 (2%)
Strand=Plus/Minus
Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162
||||| | || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 405973 GGAAGCTGGAAGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGC 405914
Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222
||||||| | |||||||| | || | || || |||| |||||| | ||
Sbjct 405913 GACACTGAACTATTCAACGAGT-----ATCTGAGTCGATAGACTTGGGAAATCTTTTGAA 405859
Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282
| | ||||| ||||||| || ||| |||| || || | |||||||||| ||||||
Sbjct 405858 AATAGTTCGTGATGGGGATTGATGCTTGTAATTTTTCATCATGAACGAGGAATTCCTAGT 405799
Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| || ||||||| | |||||||||||||||||||||||||||
Sbjct 405798 AAATGCAAGTCATCAACTTGCGTTGATTACGTCCCTGCCCTTTGTA 405753
>seq9
Length=433969
Score = 183 bits (202), Expect = 6e-44
Identities = 176/226 (78%), Gaps = 5/226 (2%)
Strand=Plus/Minus
Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162
||||| | || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 432993 GGAAGCTGGAAGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGC 432934
Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222
||||||| | |||||||| | || | || || |||| |||||| | ||
Sbjct 432933 GACACTGAACTATTCAACGAGT-----ATCTGAGTCGATAGACTTGGGAAATCTTTTGAA 432879
Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282
| | ||||| ||||||| || ||| |||| || || | |||||||||| ||||||
Sbjct 432878 AATAGTTCGTGATGGGGATTGATGCTTGTAATTTTTCATCATGAACGAGGAATTCCTAGT 432819
Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| || ||||||| | |||||||||||||||||||||||||||
Sbjct 432818 AAATGCAAGTCATCAACTTGCGTTGATTACGTCCCTGCCCTTTGTA 432773
>seq8
Length=440611
Score = 183 bits (202), Expect = 6e-44
Identities = 176/226 (78%), Gaps = 5/226 (2%)
Strand=Plus/Minus
Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162
||||| | || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 429033 GGAAGCTGGAAGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGC 428974
Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222
||||||| | |||||||| | || | || || |||| |||||| | ||
Sbjct 428973 GACACTGAACTATTCAACGAGT-----ATCTGAGTCGATAGACTTGGGAAATCTTTTGAA 428919
Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282
| | ||||| ||||||| || ||| |||| || || | |||||||||| ||||||
Sbjct 428918 AATAGTTCGTGATGGGGATTGATGCTTGTAATTTTTCATCATGAACGAGGAATTCCTAGT 428859
Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| || ||||||| | |||||||||||||||||||||||||||
Sbjct 428858 AAATGCAAGTCATCAACTTGCGTTGATTACGTCCCTGCCCTTTGTA 428813
>seq4
Length=591523
Score = 183 bits (202), Expect = 6e-44
Identities = 176/226 (78%), Gaps = 5/226 (2%)
Strand=Plus/Plus
Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162
||||| | || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 3279 GGAAGCTGGAAGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGC 3338
Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222
||||||| | |||||||| | || | || || |||| |||||| | ||
Sbjct 3339 GACACTGAACTATTCAACGAGT-----ATCTGAGTCGATAGACTTGGGAAATCTTTTGAA 3393
Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282
| | ||||| ||||||| || ||| |||| || || | |||||||||| ||||||
Sbjct 3394 AATAGTTCGTGATGGGGATTGATGCTTGTAATTTTTCATCATGAACGAGGAATTCCTAGT 3453
Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| || ||||||| | |||||||||||||||||||||||||||
Sbjct 3454 AAATGCAAGTCATCAACTTGCGTTGATTACGTCCCTGCCCTTTGTA 3499
Score = 183 bits (202), Expect = 6e-44
Identities = 176/226 (78%), Gaps = 5/226 (2%)
Strand=Plus/Minus
Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162
||||| | || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 589163 GGAAGCTGGAAGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGC 589104
Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222
||||||| | |||||||| | || | || || |||| |||||| | ||
Sbjct 589103 GACACTGAACTATTCAACGAGT-----ATCTGAGTCGATAGACTTGGGAAATCTTTTGAA 589049
Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282
| | ||||| ||||||| || ||| |||| || || | |||||||||| ||||||
Sbjct 589048 AATAGTTCGTGATGGGGATTGATGCTTGTAATTTTTCATCATGAACGAGGAATTCCTAGT 588989
Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| || ||||||| | |||||||||||||||||||||||||||
Sbjct 588988 AAATGCAAGTCATCAACTTGCGTTGATTACGTCCCTGCCCTTTGTA 588943
>seq2
Length=1866585
Score = 183 bits (202), Expect = 6e-44
Identities = 176/226 (78%), Gaps = 5/226 (2%)
Strand=Plus/Plus
Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162
||||| | || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 129 GGAAGCTGGAAGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGC 188
Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222
||||||| | |||||||| | || | || || |||| |||||| | ||
Sbjct 189 GACACTGAACTATTCAACGAGT-----ATCTGAGTCGATAGACTTGGGAAATCTTTTGAA 243
Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282
| | ||||| ||||||| || ||| |||| || || | |||||||||| ||||||
Sbjct 244 AATAGTTCGTGATGGGGATTGATGCTTGTAATTTTTCATCATGAACGAGGAATTCCTAGT 303
Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| || ||||||| | |||||||||||||||||||||||||||
Sbjct 304 AAATGCAAGTCATCAACTTGCGTTGATTACGTCCCTGCCCTTTGTA 349
>seq1
Length=1966360
Score = 183 bits (202), Expect = 6e-44
Identities = 176/226 (78%), Gaps = 5/226 (2%)
Strand=Plus/Plus
Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162
||||| | || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 6046 GGAAGCTGGAAGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCGC 6105
Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222
||||||| | |||||||| | || | || || |||| |||||| | ||
Sbjct 6106 GACACTGAACTATTCAACGAGT-----ATCTGAGTCGATAGACTTGGGAAATCTTTTGAA 6160
Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282
| | ||||| ||||||| || ||| |||| || || | |||||||||| ||||||
Sbjct 6161 AATAGTTCGTGATGGGGATTGATGCTTGTAATTTTTCATCATGAACGAGGAATTCCTAGT 6220
Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| || ||||||| | |||||||||||||||||||||||||||
Sbjct 6221 AAATGCAAGTCATCAACTTGCGTTGATTACGTCCCTGCCCTTTGTA 6266
>seq18
Length=222987
Score = 176 bits (194), Expect = 9e-42
Identities = 176/227 (78%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 103 GGAAGTTTGAGGCAATAACAGG-TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCG 161
||||| | || ||||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct 218741 GGAAGCTGGAAGCAATAACAGGGTCTGTGATGCCCTTAGATGTTCTGGGCTGCACGCGCG 218682
Query 162 CTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTA 221
| ||||||| | |||||||| | || | || || |||| |||||| | |
Sbjct 218681 CGACACTGAACTATTCAACGAGT-----ATCTGAGTCGATAGACTTGGGAAATCTTTTGA 218627
Query 222 AACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAG 281
|| | ||||| ||||||| || ||| |||| || || | |||||||||| |||||
Sbjct 218626 AAATAGTTCGTGATGGGGATTGATGCTTGTAATTTTTCATCATGAACGAGGAATTCCTAG 218567
Query 282 TAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
||| || ||||||| | |||||||||||||||||||||||||||
Sbjct 218566 TAAATGCAAGTCATCAACTTGCGTTGATTACGTCCCTGCCCTTTGTA 218520
>seq35
Length=1031885
Score = 104 bits (114), Expect = 4e-20
Identities = 96/122 (79%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 207 TGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCA 266
|||| |||||| | ||| | ||||| ||||||| || ||| |||| || || | |
Sbjct 1031840 TGGGAAATCTTTTGAAAATAGTTCGTGATGGGGATTGATGCTTGTAATTTTTCATCATGA 1031781
Query 267 ACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTG 326
||||||||| |||||||| || ||||||| | |||||||||||||||||||||||||
Sbjct 1031780 ACGAGGAATTCCTAGTAAATGCAAGTCATCAACTTGCGTTGATTACGTCCCTGCCCTTTG 1031721
Query 327 TA 328
||
Sbjct 1031720 TA 1031719
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947199488512
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |