Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastocystis_20hominis_20[genbank_20GCA_5F000151665.1_202010-07-06] 54 sequences; 18,817,245 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq27 89.7 2e-15 >seq27 Length=29948 Score = 89.7 bits (98), Expect = 2e-15 Identities = 132/186 (71%), Gaps = 1/186 (1%) Strand=Plus/Plus Query 288 TAGTGAAGGTCC-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTAC 346 |||| ||||| | |||||||||| |||| || || ||||||| || || Sbjct 9828 TAGTAAAGGTGCACGGGGTCTTTCCGTCTAACCATATATAATTCGCATCTTCACGAATAT 9887 Query 347 TGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGG 406 | |||||||| | | || ||||||| ||| ||||||||| |||||| |||| | Sbjct 9888 TTCAATTTCATAAAGTTCATAGTGGAGACAGTGGGGAAGTCGTTACACCATTCATGCACG 9947 Query 407 TCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGT 466 || | ||| ||||||||||||||||||||||||| | | ||||| |||||| Sbjct 9948 TCAATAATTAGTTGACAAGGAATTTCGCTACCTTAGGACCATCAGAGTTATGGCCGCCGA 10007 Query 467 TTACTG 472 |||||| Sbjct 10008 TTACTG 10013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702399080704