Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blastocystis_20hominis_20[genbank_20GCA_5F000151665.1_202010-07-06] 54 sequences; 18,817,245 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq13 89.7 2e-12 >seq13 Length=1458350 Score = 89.7 bits (98), Expect = 2e-12 Identities = 100/131 (76%), Gaps = 2/131 (2%) Strand=Plus/Plus Query 364411 CTCCATGAGCTTACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTC 364470 ||| ||||||| || || |||||||| || ||||||| | | ||||| ||||||||||| Sbjct 1088513 CTCGATGAGCTGTCCGATGGTCATACGCGAAGGAATGGCGTGCGGGTTCATGATGATGTC 1088572 Query 364471 AGGCACCATGCCGTCAGCGGTAAAGGGCATATCTTCGGGAGGA-ACGATGAGACCAATGG 364529 || || ||||||| |||| |||||||| ||||| | || ||| | | || || | Sbjct 1088573 GGGGACGATGCCGTTCTCGGTGAAGGGCATGTCTTCCTGCCGATACG-TCATTCCGATCG 1088631 Query 364530 TTCCCTTTTGC 364540 ||||||| ||| Sbjct 1088632 TTCCCTTCTGC 1088642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884885095894222