Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= AAMG01000026.1 Length=199 Score E Sequences producing significant alignments: (Bits) Value seq1 102 9e-20 >seq1 Length=7344524 Score = 102 bits (112), Expect = 9e-20 Identities = 141/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60 ||| |||||| ||||||||||||||||| |||||||||||| |||||||| || | || Sbjct 3206157 GCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATCCTAGCTGTCTTAGCATCCTCAC 3206216 Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120 ||||| | ||||| ||| || || | || |||| ||| || || || || Sbjct 3206217 ATCGTTCATTCAACTTAGTATACACTTGGGGACCTTAGCTGATGGTCTGGGTTGTTTCCC 3206276 Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACT-CGCGCGGCATGACTGATGCGCATT 179 ||| || | |||||||| |||||| ||||||| | | | ||| | ||| ||||| Sbjct 3206277 TCTTGGCAATGGACCTTAGCACCCACTGCCTCACTGCTGGTGCAATG--TCATG-GCATT 3206333 Query 180 CGGAGTTTGGCAGG 193 ||||||| | |||| Sbjct 3206334 CGGAGTTCGTCAGG 3206347 Score = 102 bits (112), Expect = 9e-20 Identities = 141/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60 ||| |||||| ||||||||||||||||| |||||||||||| |||||||| || | || Sbjct 5226892 GCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATCCTAGCTGTCTTAGCATCCTCAC 5226833 Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120 ||||| | ||||| ||| || || | || |||| ||| || || || || Sbjct 5226832 ATCGTTCATTCAACTTAGTATACACTTGGGGACCTTAGCTGATGGTCTGGGTTGTTTCCC 5226773 Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACT-CGCGCGGCATGACTGATGCGCATT 179 ||| || | |||||||| |||||| ||||||| | | | ||| | ||| ||||| Sbjct 5226772 TCTTGGCAATGGACCTTAGCACCCACTGCCTCACTGCTGGTGCAATG--TCATG-GCATT 5226716 Query 180 CGGAGTTTGGCAGG 193 ||||||| | |||| Sbjct 5226715 CGGAGTTCGTCAGG 5226702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537596187744