Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq5 480 2e-133 seq19 468 1e-129 seq2 336 5e-90 seq457 331 2e-88 seq3 297 5e-78 seq558 291 2e-76 seq1 264 3e-68 seq60 242 9e-62 seq4 224 2e-56 seq318 154 4e-35 seq376 152 1e-34 >seq5 Length=3486096 Score = 480 bits (532), Expect = 2e-133 Identities = 364/416 (88%), Gaps = 10/416 (2%) Strand=Plus/Minus Query 3 TCCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTA 62 ||||||||||||||||| | || | ||||||||| ||| |||||||||||||||| Sbjct 693231 TCCGATCCACAGGTCATCAC-CTCA-TTTTTCAACATAAGTGTGTTCGGTCCTCCAGTTG 693174 Query 63 GTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTT 122 | ||||| ||||||| |||||||||||| |||||||||||||||||| |||||||||| Sbjct 693173 AT-GTTACTCAACCTT-CAACCTGCCCAT-GGATAGATCGCCCGGTTT-CGGGTCTATTG 693118 Query 123 CCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAA 182 | ||||||| |||||||| ||||||||| ||| | |||||||||||||| ||||||| Sbjct 693117 CAT-GCGACTAAACGCCCTATTAAGACTCGGTTTCC-CTACGCCTCCCCTAAACGGTTAA 693060 Query 183 GCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACA 242 |||| ||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct 693059 GCTT-GCCACATACAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACGGGACG 693001 Query 243 AAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCG 302 | | ||||| |||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct 693000 A-GCCCGCTCCTACTGCTTGTACGTATACGATTTCAGGATCTATTTCACTCCCCTCTCCG 692942 Query 303 GGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTA 362 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 692941 GGGTTCTTTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCAGTCAGTAGTATTTA 692882 Query 363 GCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 ||||||||||||||||||||||| ||||||||| | || |||| ||||||||| Sbjct 692881 GCCTTGGAGGATGGTCCCCCCATCTTCAGACAACATATCACGTGTGTCGTCCTACT 692826 >seq19 Length=1029424 Score = 468 bits (518), Expect = 1e-129 Identities = 364/419 (87%), Gaps = 11/419 (3%) Strand=Plus/Plus Query 3 TCCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTA 62 ||||||||||| ||||| || || ||||| ||||| ||| |||||||||||||||| Sbjct 835955 TCCGATCCACAAGTCATCCC-CTGGCTTTT-CAACGACAGTGGGTTCGGTCCTCCAGTGC 836012 Query 63 GTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTT 122 | ||||| ||||| |||||||| ||| |||||||||||||||||| ||||||||| Sbjct 836013 CT-GTTACGGCACCTT-CAACCTGCTCAT-GGATAGATCGCCCGGTTT-CGGGTCTATG- 836067 Query 123 CCCAGCGACTAGA-CGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTA 181 ||||||||||| | ||||||| | ||||||| ||| | ||||| |||||||| |||||| Sbjct 836068 CCCAGCGACTAAATCGCCCTATTCAGACTCGGTTTCC-CTACGGCTCCCCTAAACGGTTA 836126 Query 182 AGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAAC 241 | || ||||||||| ||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 836127 ACCTC-GCCACTGAACATAAGTCGCTGACCCATTATACAAAAGGTACGCCGTCACGGAAC 836185 Query 242 AAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCC 301 || || ||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct 836186 AA-GTCCGCTCCGACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCACA 836244 Query 302 GGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTT 361 ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct 836245 GGGGTTCTTTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCAGTCAGGAGTATTT 836304 Query 362 AGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 |||||||||||||||||||||||| |||||||| | || |||| |||||||||||| Sbjct 836305 AGCCTTGGAGGATGGTCCCCCCATGTTCAGACAGGATATCACGTGTCCCGTCCTACTCG 836363 >seq2 Length=6328565 Score = 336 bits (372), Expect = 5e-90 Identities = 330/413 (80%), Gaps = 16/413 (4%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 |||||| |||| || ||||||||||| | || |||||||||||||||| || ||| Sbjct 5617126 CCACAGCTCATCCCCG--ACTTTTTCAACAGGCGTGGGTTCGGTCCTCCAGTGCGT-GTT 5617182 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| ||||| ||||||| |||| || |||||| | |||||| |||||||| | ||| | Sbjct 5617183 ACCGCACCTT-CAACCTGGCCAT-GGCTAGATCACTCGGTTT-CGGGTCTAAT--CCAAC 5617237 Query 129 GA-CTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC-CCTATTCGGTTAAGCTT 186 || ||| |||||||| | ||||||||||| |||| ||||| | ||||| | |||||||| Sbjct 5617238 GAACTAAACGCCCTATTCAGACTCGCTTT-CGCTGCGCCTACACCTATCGGCTTAAGCTT 5617296 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 || | ||| |||||||||||||||||||||||||||||||| |||| | | Sbjct 5617297 -GCTCGTTAAATTAAGTCGCTGACCCATTATACAAAAGGTACGCTGTCAGGCTT----GC 5617351 Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 | |||| |||| ||||| |||| ||||||||||| || ||||||||||||| |||||| Sbjct 5617352 GCCCTCCAACTGTTTGTAGGCATCCGGTTTCAGGAACTGTTTCACTCCCCTCGTCGGGGT 5617411 Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 |||||| |||||||||||||||||| |||| ||||||||| || |||| |||| || Sbjct 5617412 ACTTTTCACCTTTCCCTCACGGTACTTGTTCGCTATCGGTCGACAAGGAGTACTTAGGCT 5617471 Query 367 TGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 |||||| |||||||||||| |||||||| |||| |||| ||| ||||||| Sbjct 5617472 TGGAGGGTGGTCCCCCCATGTTCAGACAGGATTTCACGTGTCCCGCCCTACTC 5617524 Score = 336 bits (372), Expect = 5e-90 Identities = 330/413 (80%), Gaps = 16/413 (4%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 |||||| |||| || ||||||||||| | || |||||||||||||||| || ||| Sbjct 6275639 CCACAGCTCATCCCCG--ACTTTTTCAACAGGCGTGGGTTCGGTCCTCCAGTGCGT-GTT 6275583 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| ||||| ||||||| |||| || |||||| | |||||| |||||||| | ||| | Sbjct 6275582 ACCGCACCTT-CAACCTGGCCAT-GGCTAGATCACTCGGTTT-CGGGTCTAAT--CCAAC 6275528 Query 129 GA-CTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC-CCTATTCGGTTAAGCTT 186 || ||| |||||||| | ||||||||||| |||| ||||| | ||||| | |||||||| Sbjct 6275527 GAACTAAACGCCCTATTCAGACTCGCTTT-CGCTGCGCCTACACCTATCGGCTTAAGCTT 6275469 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 || | ||| |||||||||||||||||||||||||||||||| |||| | | Sbjct 6275468 -GCTCGTTAAATTAAGTCGCTGACCCATTATACAAAAGGTACGCTGTCAGGCTT----GC 6275414 Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 | |||| |||| ||||| |||| ||||||||||| || ||||||||||||| |||||| Sbjct 6275413 GCCCTCCAACTGTTTGTAGGCATCCGGTTTCAGGAACTGTTTCACTCCCCTCGTCGGGGT 6275354 Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 |||||| |||||||||||||||||| |||| ||||||||| || |||| |||| || Sbjct 6275353 ACTTTTCACCTTTCCCTCACGGTACTTGTTCGCTATCGGTCGACAAGGAGTACTTAGGCT 6275294 Query 367 TGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 |||||| |||||||||||| |||||||| |||| |||| ||| ||||||| Sbjct 6275293 TGGAGGGTGGTCCCCCCATGTTCAGACAGGATTTCACGTGTCCCGCCCTACTC 6275241 >seq457 Length=62169 Score = 331 bits (366), Expect = 2e-88 Identities = 332/417 (80%), Gaps = 22/417 (5%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACG-GTAGTCGGTTCGGTCCTCCAGTTAGTAGT 67 ||||| ||||| ||| | || ||||| ||| | ||||||||||||||||| || || Sbjct 44201 CCACAAGTCATCCCGACACATTG--CAACGTGTA-TGGGTTCGGTCCTCCAGTTGGT-GT 44146 Query 68 TACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAG 127 ||||||||||| |||||||| ||| || |||||| | ||||| |||||||| | | | Sbjct 44145 TACCCAACCTT-CAACCTGCTCAT-GGCTAGATCACTTGGTTT-CGGGTCTAATGCA-AC 44090 Query 128 CGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC-CCTATTCGGTTAAGCTT 186 |||| ||||||| ||||||||||||| |||||||||| | ||||| | |||||||| Sbjct 44089 AAACTATTCGCCCTATTAAGACTCGCTTT-CGCTACGCCTACACCTATCGGCTTAAGCTT 44031 Query 187 ---TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAA 243 ||| || | ||||||| |||||||||||||||||||||||| |||| || Sbjct 44030 GCTTGCTAC----ACTAAGTCGTTGACCCATTATACAAAAGGTACGCGGTCAGCCTT--- 43978 Query 244 AGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGG 303 | || ||||||||| ||||| |||| | |||||||| ||||||||||||||| ||| Sbjct 43977 -GCGGCCTCCCACTGTTTGTAGGCATCCAGTTTCAGGTACTATTTCACTCCCCTTGTCGG 43919 Query 304 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAG 363 ||| |||||| |||||||||||||||||| |||| |||||||| | || |||| |||| Sbjct 43918 GGTGCTTTTCACCTTTCCCTCACGGTACTGGTTCGCTATCGGTGATGCACGAGTACTTAG 43859 Query 364 CCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 |||||||| |||||||||||| |||||||| | |||| |||| |||| |||||||| Sbjct 43858 GCTTGGAGGGTGGTCCCCCCATGTTCAGACAGAATTTCACGTGTTCCGCCCTACTCG 43802 >seq3 Length=4400433 Score = 297 bits (328), Expect = 5e-78 Identities = 325/416 (78%), Gaps = 21/416 (5%) Strand=Plus/Minus Query 10 CACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTA 69 |||||||||| ||| |||||| ||||| |||||||| |||||||| | |||| Sbjct 2143550 CACAGGTCAT-CCGAGCACTTTT-CAACGTGCAACGGTTCGGGCCTCCAGTGCAT-GTTA 2143494 Query 70 CCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCG 129 | ||||| || |||||||||| |||||| | | || |||||||| | | | Sbjct 2143493 CTGCACCTT-CACCCTGCCCATACC-TAGATCACTTGCCTT-CGGGTCTAATGCT-ACAT 2143438 Query 130 ACT-AGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC-CCTATTCGGTTAAGCTT- 186 ||| || ||||||| | ||||||||||| |||||||||| | ||||| | |||||||| Sbjct 2143437 ACTCAGTCGCCCTATTCAGACTCGCTTT-CGCTACGCCTACACCTATCGGCTTAAGCTTG 2143379 Query 187 --TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAA 244 ||| || | ||||||| ||||||||||||||||||||||| ||||| | | || Sbjct 2143378 CATGCAAC----ACTAAGTCGTTGACCCATTATACAAAAGGTACGAGGTCACTC--CGAA 2143325 Query 245 GTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGG 304 | | ||||| | ||||||| |||| |||||||||| || ||||||||||||| |||| Sbjct 2143324 GAG--CTCCCTCAGCTTGTAAGCATCCGGTTTCAGGTACTGTTTCACTCCCCTCATCGGG 2143267 Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364 || |||||| |||||||||||||||||||||||||||||||| || || |||| |||| Sbjct 2143266 GTACTTTTCATCTTTCCCTCACGGTACTAGTTCACTATCGGTCGGTAAGGAGTACTTAGG 2143207 Query 365 CTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 |||||||| |||||||||||| |||||||| |||| |||| ||| |||||||| Sbjct 2143206 CTTGGAGGGTGGTCCCCCCATGTTCAGACAGGATTTCACGTGTCCCGCCCTACTCG 2143151 >seq558 Length=35882 Score = 291 bits (322), Expect = 2e-76 Identities = 322/412 (78%), Gaps = 14/412 (3%) Strand=Plus/Plus Query 10 CACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTA 69 |||| |||| ||| | |||||||||| | || ||||||| |||||||| || |||| Sbjct 13666 CACAACTCATCCCG--ACCTTTTTCAACAGGTGTGGGTTCGGACCTCCAGTGCGT-GTTA 13722 Query 70 CCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCG 129 || ||||| || |||| ||| | |||||| | |||||| ||||||| | |||| Sbjct 13723 CCGCACCTT-CATCCTGGTCAT-GCCTAGATCACTCGGTTT-CGGGTCTGAT-CCCACGA 13778 Query 130 ACT-AGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC-CCTATTCGGTTAAGCTTT 187 ||| | ||||||| ||||||||||||| |||| ||||| | |||| | |||||||| Sbjct 13779 ACTCATGCGCCCTATTAAGACTCGCTTT-CGCTGCGCCTACACCTAACGGCTTAAGCTT- 13836 Query 188 GCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTG 247 || | | | |||||| |||||||||||||||||||||||| |||| || ||| | | Sbjct 13837 GCTCGTAAGACCAAGTCGATGACCCATTATACAAAAGGTACGCTGTCAGCCCTCAAGG-G 13895 Query 248 GGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTT 307 | |||| |||| ||||| || | |||||||||| || ||||||||||||| |||||| Sbjct 13896 GCCTCCAACTGATTGTAGGCGTTCGGTTTCAGGTACTGTTTCACTCCCCTCGTCGGGGTG 13955 Query 308 CTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTT 367 |||||| |||||||||||||||||| |||| |||||||||||| || |||| |||||||| Sbjct 13956 CTTTTCACCTTTCCCTCACGGTACTGGTTCGCTATCGGTCAGTAAGGAGTACTTAGCCTT 14015 Query 368 -GGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 ||||| |||||| || || |||| ||| |||| |||| ||| |||||| Sbjct 14016 CGGAGG-TGGTCCTCCGATCTTCAAACAGGATTTCACGTGTCCCGCCCTACT 14066 >seq1 Length=7344524 Score = 264 bits (292), Expect = 3e-68 Identities = 326/426 (77%), Gaps = 31/426 (7%) Strand=Plus/Plus Query 4 CCGATCCACAGGTCATTCCGCTAAC-TTTTTCAACG-GTAGTCGGTTCGGTCCTCCAGTT 61 || ||||||||||||| ||| ||| ||||||||| ||| |||||||||||||||||| Sbjct 3206474 CCTATCCACAGGTCAT-CCG--AACATTTTTCAACATGTAC-CGGTTCGGTCCTCCAGTT 3206529 Query 62 AGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATT 121 | || |||||||| |||||||||||| ||||||||| || ||||| || ||||| Sbjct 3206530 GGAGACTATCCAACCTT-CAACCTGCCCAT-GGATAGATCACCGGGTTT-CGCGTCTA-- 3206584 Query 122 TCCCAGCGACTAGA---CGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC---CCTATT 175 ||| | ||||| ||||||| | ||||||||||| |||| ||||| | ||| Sbjct 3206585 -CCC--CTACTAGCTCTCGCCCTATTCAGACTCGCTTT-CGCTTCGCCTACAGCCCTGAA 3206640 Query 176 CGG-TTAAGCTTTGCCACTGAAAA-TAAGTCGCTGACCCATTATACAAAAGGTACGCAGT 233 | |||| ||| || | | | ||| ||| | | |||||| ||||||| |||| || Sbjct 3206641 GGCCTTAAACTT-GCTAGTAAGGTGTAACTCGTAGGCTCATTATGCAAAAGGCACGCCGT 3206699 Query 234 CACCCAACAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTC 293 ||||| | |||||| || ||||||| || ||||||||||| ||| |||||||| Sbjct 3206700 CACCCGAA------GGCTCCGACCGCTTGTAAGCGCACGGTTTCAGGGTCT-TTTCACTC 3206752 Query 294 CCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAG 353 |||| |||||||||||| |||||||||||||||||| |||||||||||||| |||| Sbjct 3206753 CCCTTCTGGGGGTTCTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTCTCTCAG 3206812 Query 354 TAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTC 413 ||||||||||||| | ||||||| || ||| ||||||||| |||||| | ||| | Sbjct 3206813 GAGTATTTAGCCTTAGCGGATGGTGCCGCCAGATTCAGACAGGATTTCTCCGGTCCCGCC 3206872 Query 414 CTACTC 419 ||||| Sbjct 3206873 TTACTC 3206878 Score = 264 bits (292), Expect = 3e-68 Identities = 326/426 (77%), Gaps = 31/426 (7%) Strand=Plus/Minus Query 4 CCGATCCACAGGTCATTCCGCTAAC-TTTTTCAACG-GTAGTCGGTTCGGTCCTCCAGTT 61 || ||||||||||||| ||| ||| ||||||||| ||| |||||||||||||||||| Sbjct 5226575 CCTATCCACAGGTCAT-CCG--AACATTTTTCAACATGTAC-CGGTTCGGTCCTCCAGTT 5226520 Query 62 AGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATT 121 | || |||||||| |||||||||||| ||||||||| || ||||| || ||||| Sbjct 5226519 GGAGACTATCCAACCTT-CAACCTGCCCAT-GGATAGATCACCGGGTTT-CGCGTCTA-- 5226465 Query 122 TCCCAGCGACTAGA---CGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC---CCTATT 175 ||| | ||||| ||||||| | ||||||||||| |||| ||||| | ||| Sbjct 5226464 -CCC--CTACTAGCTCTCGCCCTATTCAGACTCGCTTT-CGCTTCGCCTACAGCCCTGAA 5226409 Query 176 CGG-TTAAGCTTTGCCACTGAAAA-TAAGTCGCTGACCCATTATACAAAAGGTACGCAGT 233 | |||| ||| || | | | ||| ||| | | |||||| ||||||| |||| || Sbjct 5226408 GGCCTTAAACTT-GCTAGTAAGGTGTAACTCGTAGGCTCATTATGCAAAAGGCACGCCGT 5226350 Query 234 CACCCAACAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTC 293 ||||| | |||||| || ||||||| || ||||||||||| ||| |||||||| Sbjct 5226349 CACCCGAA------GGCTCCGACCGCTTGTAAGCGCACGGTTTCAGGGTCT-TTTCACTC 5226297 Query 294 CCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAG 353 |||| |||||||||||| |||||||||||||||||| |||||||||||||| |||| Sbjct 5226296 CCCTTCTGGGGGTTCTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTCTCTCAG 5226237 Query 354 TAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTC 413 ||||||||||||| | ||||||| || ||| ||||||||| |||||| | ||| | Sbjct 5226236 GAGTATTTAGCCTTAGCGGATGGTGCCGCCAGATTCAGACAGGATTTCTCCGGTCCCGCC 5226177 Query 414 CTACTC 419 ||||| Sbjct 5226176 TTACTC 5226171 >seq60 Length=599436 Score = 242 bits (268), Expect = 9e-62 Identities = 322/425 (76%), Gaps = 28/425 (7%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 |||||| |||| | ||| | ||||||||| |||| |||||| |||||| |||||| || Sbjct 38023 CCACAGCTCAT-CTGCTGA-TTTTTCAACATCAGTCAGTTCGGACCTCCACTTAGTA-TT 37967 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTC--TATTTCCCA 126 ||| || ||| || |||| |||| || |||||| |||| || |||||| || || Sbjct 37966 ACCTAAGCTT-CATCCTGGCCAT-GGTTAGATCATCCGGGTT-CGGGTCCGTAATTG--- 37913 Query 127 GCGAC-TAG--ACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAG 183 | ||| | | |||||||| ||||||||| ||||| ||| | |||| |||| || | Sbjct 37912 GTGACATTGTAACGCCCTATTAAGACTCG-TTTTCACTATGGCTCCAGTATTT--TTTAC 37856 Query 184 CTT-----TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCC 238 ||| |||||| | | ||||||| | | |||| | ||| ||| |||||| || | Sbjct 37855 CTTAACCGTGCCACCAACTACAAGTCGCCGGCTCATTCTTCAACAGGCACGCAGGCAGAC 37796 Query 239 AACAAA-GTGGGC-TCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCC 296 ||| || | | | ||||||||| || |||||||||| | ||| ||||||||||| Sbjct 37795 GTTAAAAGTCATCCTTCTGCTGCTTGTAAGCTTACGGTTTCATGTTCT-TTTCACTCCCC 37737 Query 297 TCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAG 356 || |||||||||||||| ||||||||||||||||||| | |||||||||||| ||||||| Sbjct 37736 TC-CCGGGGTTCTTTTCACCTTTCCCTCACGGTACTATTACACTATCGGTCATTCAGTAG 37678 Query 357 TATTTAGCCTT-GGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCT 415 ||||||||||| |||| |||||| | || ||||| || |||| ||||| || | || Sbjct 37677 TATTTAGCCTTACGAGG-TGGTCCTCGCAGATTCACACGGGATTTCACGTGCCCCATGCT 37619 Query 416 ACTCG 420 ||||| Sbjct 37618 ACTCG 37614 Score = 242 bits (268), Expect = 9e-62 Identities = 322/425 (76%), Gaps = 28/425 (7%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 |||||| |||| | ||| | ||||||||| |||| |||||| |||||| |||||| || Sbjct 89726 CCACAGCTCAT-CTGCTGA-TTTTTCAACATCAGTCAGTTCGGACCTCCACTTAGTA-TT 89782 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTC--TATTTCCCA 126 ||| || ||| || |||| |||| || |||||| |||| || |||||| || || Sbjct 89783 ACCTAAGCTT-CATCCTGGCCAT-GGTTAGATCATCCGGGTT-CGGGTCCGTAATTG--- 89836 Query 127 GCGAC-TAG--ACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAG 183 | ||| | | |||||||| ||||||||| ||||| ||| | |||| |||| || | Sbjct 89837 GTGACATTGTAACGCCCTATTAAGACTCG-TTTTCACTATGGCTCCAGTATTT--TTTAC 89893 Query 184 CTT-----TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCC 238 ||| |||||| | | ||||||| | | |||| | ||| ||| |||||| || | Sbjct 89894 CTTAACCGTGCCACCAACTACAAGTCGCCGGCTCATTCTTCAACAGGCACGCAGGCAGAC 89953 Query 239 AACAAA-GTGGGC-TCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCC 296 ||| || | | | ||||||||| || |||||||||| | ||| ||||||||||| Sbjct 89954 GTTAAAAGTCATCCTTCTGCTGCTTGTAAGCTTACGGTTTCATGTTCT-TTTCACTCCCC 90012 Query 297 TCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAG 356 || |||||||||||||| ||||||||||||||||||| | |||||||||||| ||||||| Sbjct 90013 TC-CCGGGGTTCTTTTCACCTTTCCCTCACGGTACTATTACACTATCGGTCATTCAGTAG 90071 Query 357 TATTTAGCCTT-GGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCT 415 ||||||||||| |||| |||||| | || ||||| || |||| ||||| || | || Sbjct 90072 TATTTAGCCTTACGAGG-TGGTCCTCGCAGATTCACACGGGATTTCACGTGCCCCATGCT 90130 Query 416 ACTCG 420 ||||| Sbjct 90131 ACTCG 90135 >seq4 Length=3599618 Score = 224 bits (248), Expect = 2e-56 Identities = 311/423 (74%), Gaps = 18/423 (4%) Strand=Plus/Plus Query 3 TCCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTA 62 ||| | || ||| |||| ||| || ||||||||| | |||||||||||| || || Sbjct 2864944 TCCTACCCTCAGCTCAT-CCGAGAA-TTTTTCAACATTCACCGGTTCGGTCCTTCACGTA 2865001 Query 63 GTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTT 122 ||| | || || ||||||||| ||| ||| |||||| || |||||||||| Sbjct 2865002 GTA--TCACCTACGCTTCAACCTGGCCA-AGGGTAGATCACCTCCGCTTCGGGTCTAGCA 2865058 Query 123 CC--CAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCT----ATTC 176 | |||| | | | ||||||| | |||||||||| |||| ||||| | | | Sbjct 2865059 CATGCAGCTA-TGGTCGCCCTATTCGGACTCGCTTT-CGCTTCGCCTACGTTCCAGAAGA 2865116 Query 177 GGTTAAGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCAC 236 |||| ||| ||||| | | ||| |||| ||| ||||| ||||||| |||| |||| Sbjct 2865117 ACTTAAACTT-GCCACATATACTAACTCGCAGACTCATTAAGCAAAAGGCACGCCATCAC 2865175 Query 237 CCAACAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCC 296 || | ||| ||||| || |||||| ||| ||||||||||| ||||||||||||| | Sbjct 2865176 CC--CGAAG--GGCTCTGACACCTTGTAGGCACACGGTTTCAGGTTCTATTTCACTCCGC 2865231 Query 297 TCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAG 356 || | | |||||||||| |||||||||||||||||| |||||||||||||| | | ||| Sbjct 2865232 TCACAGCGGTTCTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTCGCTAACTAG 2865291 Query 357 TATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTA 416 ||||||||||| | |||||| | || ||||| || ||||| |||| |||| || Sbjct 2865292 TATTTAGCCTTATGCGGTGGTCCGCACAGATTCATACGGCGTTTCACGTGTGCCGTATTA 2865351 Query 417 CTC 419 ||| Sbjct 2865352 CTC 2865354 Score = 224 bits (248), Expect = 2e-56 Identities = 311/423 (74%), Gaps = 18/423 (4%) Strand=Plus/Plus Query 3 TCCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTA 62 ||| | || ||| |||| ||| || ||||||||| | |||||||||||| || || Sbjct 3217384 TCCTACCCTCAGCTCAT-CCGAGAA-TTTTTCAACATTCACCGGTTCGGTCCTTCACGTA 3217441 Query 63 GTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTT 122 ||| | || || ||||||||| ||| ||| |||||| || |||||||||| Sbjct 3217442 GTA--TCACCTACGCTTCAACCTGGCCA-AGGGTAGATCACCTCCGCTTCGGGTCTAGCA 3217498 Query 123 CC--CAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCT----ATTC 176 | |||| | | | ||||||| | |||||||||| |||| ||||| | | | Sbjct 3217499 CATGCAGCTA-TGGTCGCCCTATTCGGACTCGCTTT-CGCTTCGCCTACGTTCCAGAAGA 3217556 Query 177 GGTTAAGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCAC 236 |||| ||| ||||| | | ||| |||| ||| ||||| ||||||| |||| |||| Sbjct 3217557 ACTTAAACTT-GCCACATATACTAACTCGCAGACTCATTAAGCAAAAGGCACGCCATCAC 3217615 Query 237 CCAACAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCC 296 || | ||| ||||| || |||||| ||| ||||||||||| ||||||||||||| | Sbjct 3217616 CC--CGAAG--GGCTCTGACACCTTGTAGGCACACGGTTTCAGGTTCTATTTCACTCCGC 3217671 Query 297 TCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAG 356 || | | |||||||||| |||||||||||||||||| |||||||||||||| | | ||| Sbjct 3217672 TCACAGCGGTTCTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTCGCTAACTAG 3217731 Query 357 TATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTA 416 ||||||||||| | |||||| | || ||||| || ||||| |||| |||| || Sbjct 3217732 TATTTAGCCTTATGCGGTGGTCCGCACAGATTCATACGGCGTTTCACGTGTGCCGTATTA 3217791 Query 417 CTC 419 ||| Sbjct 3217792 CTC 3217794 >seq318 Length=132058 Score = 154 bits (170), Expect = 4e-35 Identities = 300/424 (71%), Gaps = 23/424 (5%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| || | | ||||||||| | ||||||||| |||| || || ||| Sbjct 47466 CCACAACTCATCCCACGA--TTTTTCAACATCGATGGGTTCGGTCTTCCACTTGGT-GTT 47410 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||| ||| || |||| |||| || |||||| ||||| || |||||| || || Sbjct 47409 ACCCAAGCTT-CATCCTGGCCAT-GGTTAGATCACCCGGGTT-CGGGTCCATAAGA-AGT 47354 Query 129 GACT-AGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCC---CTATTCGGTTAAGC 184 ||| | ||||||| | |||| | ||||| || | || | || | | | | | Sbjct 47353 GACGGAAACGCCCTGTGAGGACTTG-TTTTCACTCTGGCTTCGGGTCTCTCCCCCTTAAC 47295 Query 185 TTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCAC---CCAAC 241 |||||| ||||||||| | | |||| | | | ||| |||| |||| ||| | Sbjct 47294 CACGCCACTCCCTATAAGTCGCCGGCTCATTCTTCCACAGGCACGCGGTCAGGGTCCAGC 47235 Query 242 AAAGTGGGC---TCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTC 298 |||| | | |||||| |||||| | ||||||||| | || ||||||||||| Sbjct 47234 AAAGCAGCCCCCTCCCACAGCTTGTCAGATAACGGTTTCATGTACTTTTTCACTCCCCAG 47175 Query 299 TCCGGGGTTCT-TTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGT 357 |||||||| |||| |||||||||| ||||||| ||| |||||||||| |||| ||| Sbjct 47174 AA-GGGGTTCTCTTTCACCTTTCCCTCGCGGTACTC-TTCGCTATCGGTCACTCAGGAGT 47117 Query 358 ATTTAGCCTT-GGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTA 416 |||||||||| |||| |||||| | | ||||| || |||| ||||| || | ||| Sbjct 47116 ATTTAGCCTTACGAGG-TGGTCCTCGCTGATTCACACGGGATTTCACGTGCCCCATGCTA 47058 Query 417 CTCG 420 |||| Sbjct 47057 CTCG 47054 >seq376 Length=97167 Score = 152 bits (168), Expect = 1e-34 Identities = 151/193 (78%), Gaps = 7/193 (4%) Strand=Plus/Minus Query 203 TCGCTGACCCATTATACAAAAGGTACGCAGTCACCC-----AACAAAGTGGGCTCCCACT 257 ||||||||||||||||||| |||||||| |||||| | |||| |||||||||| Sbjct 71453 TCGCTGACCCATTATACAAGAGGTACGCGGTCACCTGCTCTAGGAAAGCAGGCTCCCACT 71394 Query 258 GCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCT 317 | || || |||| |||||||||||||| |||||||||| | ||||||| ||| ||| Sbjct 71393 GTTTTTATGCATCCGGTTTCAGGATCTTTTTCACTCCCTGCAATAGGGTTCTCTTCTCCT 71334 Query 318 TTCCCTCACGGTACTAGTTCACTATCGGTCAG-TCAGTAGTATTTAGCCTTGGAGGATGG 376 ||||||||||||||| |||||||| |||||| ||| | ||| | || | || ||| Sbjct 71333 TTCCCTCACGGTACTCATTCACTATTGGTCAGAGCAG-ATCTTTTTGGCTCAGGGGGTGG 71275 Query 377 TCCCCCCATATTC 389 |||||| || ||| Sbjct 71274 TCCCCCTATCTTC 71262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241590911488