Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= AAMG01001416.1 Length=341 Score E Sequences producing significant alignments: (Bits) Value seq6 172 1e-40 >seq6 Length=3173221 Score = 172 bits (190), Expect = 1e-40 Identities = 220/302 (73%), Gaps = 1/302 (0%) Strand=Plus/Minus Query 10 CTTGCTCGCCACCGGCAACAACACCAGGTTGGCACTGGCCACGCCGTAGATGGTGGCGAC 69 |||| | || ||||| || |||| ||||||||| |||||| ||||| || |||||||| Sbjct 2103769 CTTGTTGGCGACCGGAAAAAACAGCAGGTTGGCCAGGGCCACACCGTAAATAGTGGCGAC 2103710 Query 70 AAACGCCACGGCAATGCCGCTGCCCAGTTGCGAAGGGTCGGCGAGGTTGCCCATCACGTG 129 ||| || || || ||||||||||| | || || | || || ||| || || Sbjct 2103709 AAAGGCGGTCGCGATCCCGCTGCCCAGAGACTGTGGATCCTCCAGATTAGTCATTACCTG 2103650 Query 130 GATCAGGCCCATCACCGCACCGATGATGCCGATGGTCGGCGCGTAGCCGCCCATGCTTTC 189 |||||| ||||||||||| |||||||||||||||||||||| ||| ||||||||| || Sbjct 2103649 GATCAGCCCCATCACCGCGCCGATGATGCCGATGGTCGGCGAGTAACCGCCCATGGCCTC 2103590 Query 190 AAAGACTTTGGCGGCGTTGATATCGCGGCTTTCCTGGGTGGTAGAAATCCACTTCCCGAA 249 || |||||||||| | | ||| || ||| ||| | || |||||| ||| | Sbjct 2103589 GAACACTTTGGCGGATTCCAGATCACGCTGCTCCCGGG-ACTCGAGATCCACCTCCATGA 2103531 Query 250 GTCTGCGAATCGCTTCCGGCTCGGCGCCGTCCACCAGCAGTTGCAGGCCTTTGCGCGCGT 309 | | || | ||||| || || |||||||||| |||||||| || ||||| ||| Sbjct 2103530 TGCCCCTGATGGTTTCCGTTTCTGCTCCGTCCACCAACAGTTGCAACCCCTTGCGGGCGA 2103471 Query 310 AG 311 || Sbjct 2103470 AG 2103469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 988792761984