Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= AAMG01001645.1 Length=355 Score E Sequences producing significant alignments: (Bits) Value seq6 93.3 9e-17 >seq6 Length=3173221 Score = 93.3 bits (102), Expect = 9e-17 Identities = 195/287 (68%), Gaps = 9/287 (3%) Strand=Plus/Minus Query 9 CTGGCGCCGCAGCATGTGAAAGTGCCGTCGGGCTCGTCGGTGCGCCTGGAC--TACAGCG 66 ||||||||| ||| ||| | ||| |||| | ||||||||||||| ||| || Sbjct 419103 CTGGCGCCGACGCACCTGACCATCCCGACGGGTCAGCGGGTGCGCCTGGACTATACCGCC 419044 Query 67 AACAGCCG-CCGATCCTGGCGGTGCGCCTGCAGGAATTGTTCGGCCTGGCGGACACACCG 125 ||| | | ||| | ||||||| ||||||| |||||||| | |||| || ||| Sbjct 419043 GACAACGGTCCGGTTCTGGCGGCCAAGCTGCAGGCCCTGTTCGGCTGGACGGAGACTCCG 418984 Query 126 CGCATTGCCGGCGGGCG---CCAGGTGGTCAAGTTGCACCTGCTGTCCCCGTCGCGCAGG 182 | | || |||||||| | |||||| | | || ||||| || ||| | | | Sbjct 418983 ACCGTGGCAGGCGGGCGGAAACCGGTGGT---GATCCATCTGCTCTCACCGGCCCAGCGC 418927 Query 183 CCGGTGCAGGTGACCCAGGATCTGGCGAACTTCTGGCGCAGTACCTACGCCGAGGTGAAG 242 || || ||| ||| ||||||||| | |||||||||| |||| |||||||| Sbjct 418926 CCCCTGGCGGTCACCGCGGATCTGGCCAGTTTCTGGCGCAACGCCTATCCCGAGGTGCGC 418867 Query 243 AAGGATCTGAAGGGGCGGTATCCGAAGCATTATTGGCCGGATGATCC 289 ||||| || || ||||| || |||||| |||||||| || || Sbjct 418866 AAGGACATGCGTGGACGGTACCCCAAGCATCCCTGGCCGGAAGACCC 418820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1033592434048