Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= AAMG01002051.1 Length=353 Score E Sequences producing significant alignments: (Bits) Value seq6 102 2e-19 >seq6 Length=3173221 Score = 102 bits (112), Expect = 2e-19 Identities = 238/354 (67%), Gaps = 4/354 (1%) Strand=Plus/Plus Query 2 GACCGCCTGCGCCATGTGGCGGAGCGCGCCGAGCTGGGTGAAGGCCGCGAAGCGATCATC 61 ||||||||||| || | | ||||| | || |||| || ||||| || || || Sbjct 1079623 GACCGCCTGCGTTATATTTCCGAGCGTACGGAAGTGGGCGAGAAGCGCGAGGCAATTCTC 1079682 Query 62 GCCGTGACCATTCCCGAGAAGCCCGGCAGCTTCAAGGCGTTCTGCGAGGCCGTGGGCAAG 121 || |||||||| || ||||| || ||| ||||||| | || | | ||| || |||| Sbjct 1079683 GCGGTGACCATCCCGGAGAAACCGGGCGCCTTCAAGACCTTTATCAACGCCCTGCACAAG 1079742 Query 122 CGCCAGATCACCGAATTCAACTACCGTTTCCACTCCGGCAGCGAGGCGCAC-ATCTTTGT 180 ||| |||||||| |||||||| || | | | | || | | || ||| ||||| || Sbjct 1079743 CGCAGCATCACCGAGTTCAACTATCGCTACGCCGATGCCACCAATGC-CACGATCTTCGT 1079801 Query 181 CGGCGTGCAGACCCACCCCGACACCGACCCCCGCAGCGCGCTGATCGCCAG-CCTGACCG 239 ||| | |||| | | | | | || ||| | ||| | || | ||| | Sbjct 1079802 GGGCATCCAGATCGCAGCAGGCGGCCACGGCCGTGAAGACCTGGT-GCAGGATCTGCGGG 1079860 Query 240 AGCAGGGTTTCCCGGTGCTGGACCTGACCGAGAATGAGCTGGCCAAGCTGCACATCCGCC 299 || | || | | |||| | || ||||| || | || |||||||||| |||||| |||| Sbjct 1079861 AGAACGGCTACTCGGTCGTCGATCTGACTGACAGCGATCTGGCCAAGCAGCACATTCGCC 1079920 Query 300 ATATGGTCGGCGGCCATGCGGCGCACGTCAGCAATGAAGTGGTGTTCCGCTTCG 353 | ||||| |||||||| ||| || | ||| |||||| ||||||| |||| Sbjct 1079921 ACATGGTAGGCGGCCACGCGCCGACCATCACCAATGAGAAAGTGTTCCAGTTCG 1079974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027192480896