Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq19 412 8e-113 seq5 363 4e-98 seq2 306 9e-81 seq3 286 8e-75 seq558 264 3e-68 seq318 262 1e-67 seq60 219 1e-54 seq4 194 4e-47 seq1 187 6e-45 >seq19 Length=1029424 Score = 412 bits (456), Expect = 8e-113 Identities = 344/417 (82%), Gaps = 8/417 (2%) Strand=Plus/Plus Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 60 || |||||||||||||| |||||||||| |||||||||||||||| |||||| |||| || Sbjct 838595 GTGCTTTACAACCCGAAAGCCTTCTTCACACACGCGGCATGGCTGGATCAGGGTTGCCCC 838654 Query 61 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 120 |||||| |||||||||||||||||||||||||||||||| || |||||||||||| || Sbjct 838655 CATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTTCGGGCCGTGTCTCAGTCCCG 838714 Query 121 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCC 180 |||||||| |||||||||||||||||||| |||||||||||| ||| |||| ||||||| Sbjct 838715 ATGTGGCTGATCATCCTCTCAGACCAGCTACGGATCGTCGCCTTGGTAGGCCTTTACCCC 838774 Query 181 GCCAACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCT 240 ||||||||||||||| | | || ||||| |||| | ||| |||||| ||||| || Sbjct 838775 ACCAACTAGCTAATCCGACATAGGCACATCCAATAGCGCAAGGTCCGAAGATCCCCTGCT 838834 Query 241 TTGGTCTTGCGACG---TTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCA 297 | || ||| | || ||||||||| | |||||| || |||||||| | | Sbjct 838835 T---TCCCCCGAAGGGCGTACGCGGTATTAATCCGGGTTTCCCCGGGCTATCCCCCACTA 838891 Query 298 TCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTG 357 |||||||||| | ||||||||||||||||||| |||||||||| | |||||| Sbjct 838892 CTGGGCAGTTTCCTATGCATTACTCACCCGTCCGCCGCTCGTCAGCG-GGATGCAAGC-A 838949 Query 358 CTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 | |||||||||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct 838950 CCCCCTGTTACCGCTCGACTTGCATGTGTTAAGCCTGCCGCCAGCGTTCAATCTGAG 839006 >seq5 Length=3486096 Score = 363 bits (402), Expect = 4e-98 Identities = 334/417 (80%), Gaps = 23/417 (6%) Strand=Plus/Minus Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 60 || ||||||||||| | |||||||||| |||||||||||||||| ||||||||| |||| Sbjct 684870 GTGCTTTACAACCCTAGAGCCTTCTTCACACACGCGGCATGGCTGGATCAGGCTTTCGCC 684811 Query 61 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 120 |||||| |||||||||||||||||||||||||||||||| ||| |||||||||||| ||| Sbjct 684810 CATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTTTGGGCCGTGTCTCAGTCCCA 684751 Query 121 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCC 180 || ||||| |||||||||||||||||||| ||||||||||| |||| ||||||||| | Sbjct 684750 ATGAGGCTGATCATCCTCTCAGACCAGCTATAGATCGTCGCCTTGGTGAGCCATTACCTC 684691 Query 181 GCCAACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCT 240 ||||| |||||||| | ||| |||||| |||| ||||| |||||| |||||| | Sbjct 684690 ACCAACAAGCTAATCTAACGCGGGCTCATCCAATAGCGAGAG--CCGAAG--CCCCCT-T 684636 Query 241 TTGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCA 300 || | | | | |||||||||||||| |||||||| ||| |||||| | | Sbjct 684635 TTCCCCGTAGGGTG-TATGCGGTATTAGCTTACGTTTCCATAAGTTGTCCCCCACTACTG 684577 Query 301 GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTC--GTCA-GCGAAGCAGCAAGCTG 357 ||||| |||||| | |||||| |||||||||| ||| ||| ||||| ||| Sbjct 684576 GGCAGATTCCCACGCGTTACTCTCCCGTCCGCCGCTCTACTCACCCGAAG------GCT- 684524 Query 358 CTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 || || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 684523 -------TTCGCGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 684474 >seq2 Length=6328565 Score = 306 bits (338), Expect = 9e-81 Identities = 316/411 (77%), Gaps = 32/411 (8%) Strand=Plus/Plus Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 ||||||||||| | ||||||| ||| ||||||||||||||| |||||| |||| ||||| Sbjct 5620060 CTTTACAACCCTAGGGCCTTCATCACTCACGCGGCATGGCTGGATCAGGGTTGCCCCCAT 5620119 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 ||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct 5620120 TGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTG 5620179 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 |||||| |||||||||||||||||||| |||||||||||| ||| |||||||||||| || Sbjct 5620180 TGGCTGATCATCCTCTCAGACCAGCTATGGATCGTCGCCTTGGTAGGCCATTACCCCACC 5620239 Query 184 AACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTG 243 ||||||||||||| | ||| ||||| ||| | || || | ||| | | | Sbjct 5620240 AACTAGCTAATCCAACGCGGGCCCATCC-TTAG-GCGA----TAAATCTTTCCCCCATAG 5620293 Query 244 GTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGC 303 | | || || |||||||||| |||||||| ||| | || || ||| Sbjct 5620294 GGC-----AC---ATACGGTATTAGCAGTCGTTTCCAACTGTTGTTCCGTACCTAAAGGT 5620345 Query 304 AGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCT 363 || |||||| | ||||||||||||| |||||| | ||||| || | Sbjct 5620346 AGGTTCCCACGCGTTACTCACCCGTCTGCCACT-AACTCCGAAG-----AGTT------- 5620392 Query 364 GTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||||||||||||||||||| ||||||||||||||||| |||||| Sbjct 5620393 -----CGTTCGACTTGCATGTGTTAAGCCTGCCGCCAGCGTTCGTTCTGAG 5620438 Score = 306 bits (338), Expect = 9e-81 Identities = 316/411 (77%), Gaps = 32/411 (8%) Strand=Plus/Minus Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 ||||||||||| | ||||||| ||| ||||||||||||||| |||||| |||| ||||| Sbjct 6272705 CTTTACAACCCTAGGGCCTTCATCACTCACGCGGCATGGCTGGATCAGGGTTGCCCCCAT 6272646 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 ||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct 6272645 TGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTG 6272586 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 |||||| |||||||||||||||||||| |||||||||||| ||| |||||||||||| || Sbjct 6272585 TGGCTGATCATCCTCTCAGACCAGCTATGGATCGTCGCCTTGGTAGGCCATTACCCCACC 6272526 Query 184 AACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTG 243 ||||||||||||| | ||| ||||| ||| | || || | ||| | | | Sbjct 6272525 AACTAGCTAATCCAACGCGGGCCCATCC-TTAG-GCGA----TAAATCTTTCCCCCATAG 6272472 Query 244 GTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGC 303 | | || || |||||||||| |||||||| ||| | || || ||| Sbjct 6272471 GGC-----AC---ATACGGTATTAGCAGTCGTTTCCAACTGTTGTTCCGTACCTAAAGGT 6272420 Query 304 AGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCT 363 || |||||| | ||||||||||||| |||||| | ||||| || | Sbjct 6272419 AGGTTCCCACGCGTTACTCACCCGTCTGCCACT-AACTCCGAAG-----AGTT------- 6272373 Query 364 GTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||||||||||||||||||| ||||||||||||||||| |||||| Sbjct 6272372 -----CGTTCGACTTGCATGTGTTAAGCCTGCCGCCAGCGTTCGTTCTGAG 6272327 Score = 111 bits (122), Expect = 4e-22 Identities = 117/153 (76%), Gaps = 1/153 (1%) Strand=Plus/Minus Query 42 GCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCT 101 ||||||||| |||| ||| |||||||||||||||| |||||||||| | | | || Sbjct 23699 GCTGCATCAAGCTTTCGCTCATTGTGCAATATTCCTTACTGCTGCCTTCAAATGAAACCT 23640 Query 102 GGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGC 161 || || ||||||||| |||||||| || || |||| ||||||| ||| | ||| ||| Sbjct 23639 GGGCCTTGTCTCAGTCCCAGTGTGATTGATCGTCCTACCAGACCAACTAAGCATCATCGG 23580 Query 162 CTAGGTGGGCCATTACCCCGCCAACTAGCTAAT 194 || ||| | | ||| || ||||||| ||||| Sbjct 23579 CTTGGTAAG-CTTTATCCTACCAACTACCTAAT 23548 >seq3 Length=4400433 Score = 286 bits (316), Expect = 8e-75 Identities = 178/191 (93%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 |||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||| Sbjct 2140895 TTTACAACCCTAAGGCCTTCATCATTCACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 2140836 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 2140835 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 2140776 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| |||||||||||||||||||| ||||||||||| |||| ||| ||||| | ||| Sbjct 2140775 GGCTGATCATCCTCTCAGACCAGCTATAGATCGTCGCCTTGGTGAGCCGTTACCTCACCA 2140716 Query 185 ACTAGCTAATC 195 ||||||||||| Sbjct 2140715 ACTAGCTAATC 2140705 >seq558 Length=35882 Score = 264 bits (292), Expect = 3e-68 Identities = 306/412 (74%), Gaps = 34/412 (8%) Strand=Plus/Plus Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 |||||| |||| | ||||||| ||| ||||||||||||||| |||||| |||| ||||| Sbjct 17895 CTTTACGACCCTAGGGCCTTCATCACTCACGCGGCATGGCTGGATCAGGGTTGCCCCCAT 17954 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 ||| ||| |||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct 17955 TGTCCAAGATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTG 18014 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 | |||| ||||||||| | |||||||| |||||| | || ||| |||| ||||||| || Sbjct 18015 TTGCTGATCATCCTCTAAAACCAGCTATAGATCGTAGACTTGGTAGGCCGTTACCCCACC 18074 Query 184 AACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTG 243 ||||| |||||| | ||| |||| | | || | || | ||| | | Sbjct 18075 AACTATCTAATCTAACGCGGGCCGATCCAAAGGCGATA------AATCTTTCCCCCGAAG 18128 Query 244 GTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGC 303 | | || || ||||||| ||||||||||||||| ||| ||| || | || Sbjct 18129 GGC-----AC---ATAGGGTATTACTCACCGTTTCCAGTGGCTATTCCCTACCTTTGGGT 18180 Query 304 AGTTTCCCAGACATTACTCACCCGTCCGCCACTCG-TCAGCGAAGCAGCAAGCTGCTTCC 362 | |||||| | ||||| ||||||||||| || | || ||||| | || Sbjct 18181 ACGTTCCCACGCGTTACTAACCCGTCCGCCGCTAGATC--CGAAG-----ATCT------ 18227 Query 363 TGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 || ||||||||||||||||||||||||||||||||||| |||||| Sbjct 18228 ------CGCTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCGTTCTGAG 18273 >seq318 Length=132058 Score = 262 bits (290), Expect = 1e-67 Identities = 309/410 (75%), Gaps = 16/410 (4%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 |||||||||| |||||||| || | |||||||||| ||| | |||||||| |||||||| Sbjct 99934 TTTACAACCCACAGGCCTTCCTCCTTCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATT 99875 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || ||||| |||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 99874 GCGGAAAATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 99815 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| | ||||||||||||||||| |||| |||||| || || ||||| | ||| Sbjct 99814 GGCTGATTGTCCTCTCAGACCAGCTACTGATCATCGCCTTGGCAAGCATTTACCTCCCCA 99755 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 ||||||||||| | | ||| | | | || ||| || |||| ||| Sbjct 99754 ACTAGCTAATCAGACGCAAGCCTATCTCTTGGCGGGA-----GAA--TCTCCCT-TTTAC 99703 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 || | | |||| ||||||| | |||||||||| | |||||| ||||| ||||| Sbjct 99702 TCCT--CAGCATATGAGGTATTAACAGCCGTTTCCAGCTGGTATCCCTCTCCAAGAGGCA 99645 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 ||| | | |||||||||||||||||||| | || | || | ||| ||| || Sbjct 99644 AGTTCTTACGCGTTACTCACCCGTCCGCCACTTG-CA-CAAACCCCGAAG-AGCT---TG 99591 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 | |||| ||||||||||||||| || ||||||||||||||| ||||| Sbjct 99590 TGCCCGTATGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCATCCTGAG 99541 >seq60 Length=599436 Score = 219 bits (242), Expect = 1e-54 Identities = 166/193 (86%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 5 TTTACAACCC-GAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 ||||| |||| | ||| |||||| ||||||| || ||| |||||||||||||||| Sbjct 35789 TTTACGACCCTGTGGGCTTTCTTCCCTCACGCGGTATTGCTCTGTCAGGCTTGCGCCCAT 35730 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 || || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 35729 TGCAGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 35670 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCC-CGC 182 |||||| ||||||||||| |||||||| ||||||||||| ||| |||| |||||| | Sbjct 35669 TGGCTGATCATCCTCTCAAACCAGCTACTGATCGTCGCCTTGGTAGGCCTTTACCCTTAC 35610 Query 183 CAACTAGCTAATC 195 ||||||||||||| Sbjct 35609 CAACTAGCTAATC 35597 Score = 219 bits (242), Expect = 1e-54 Identities = 166/193 (86%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 5 TTTACAACCC-GAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 ||||| |||| | ||| |||||| ||||||| || ||| |||||||||||||||| Sbjct 91960 TTTACGACCCTGTGGGCTTTCTTCCCTCACGCGGTATTGCTCTGTCAGGCTTGCGCCCAT 92019 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 || || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 92020 TGCAGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 92079 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCC-CGC 182 |||||| ||||||||||| |||||||| ||||||||||| ||| |||| |||||| | Sbjct 92080 TGGCTGATCATCCTCTCAAACCAGCTACTGATCGTCGCCTTGGTAGGCCTTTACCCTTAC 92139 Query 183 CAACTAGCTAATC 195 ||||||||||||| Sbjct 92140 CAACTAGCTAATC 92152 >seq4 Length=3599618 Score = 194 bits (214), Expect = 4e-47 Identities = 157/190 (83%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 ||||||| || ||| || || || | |||||||| | || ||||||| |||| |||||| Sbjct 2867603 TTTACAATCCTAAGACCGTCATCCTCCACGCGGCGTTGCACCATCAGGGTTGCCCCCATT 2867662 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 ||| | ||||| | ||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct 2867663 GTGAATTATTCTCGACTGCTGCCACCCGTAGGTGTCTGGACCGTGTCTCAGTTCCAGTGT 2867722 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 | ||| || |||||||||||||| || ||||||||| |||| ||| ||||| | ||| Sbjct 2867723 GACTGATCGTCCTCTCAGACCAGTTACCCGTCGTCGCCTTGGTGAGCCGTTACCTCACCA 2867782 Query 185 ACTAGCTAAT 194 ||||||| || Sbjct 2867783 ACTAGCTGAT 2867792 Score = 194 bits (214), Expect = 4e-47 Identities = 157/190 (83%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 ||||||| || ||| || || || | |||||||| | || ||||||| |||| |||||| Sbjct 3220043 TTTACAATCCTAAGACCGTCATCCTCCACGCGGCGTTGCACCATCAGGGTTGCCCCCATT 3220102 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 ||| | ||||| | ||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct 3220103 GTGAATTATTCTCGACTGCTGCCACCCGTAGGTGTCTGGACCGTGTCTCAGTTCCAGTGT 3220162 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 | ||| || |||||||||||||| || ||||||||| |||| ||| ||||| | ||| Sbjct 3220163 GACTGATCGTCCTCTCAGACCAGTTACCCGTCGTCGCCTTGGTGAGCCGTTACCTCACCA 3220222 Query 185 ACTAGCTAAT 194 ||||||| || Sbjct 3220223 ACTAGCTGAT 3220232 >seq1 Length=7344524 Score = 187 bits (206), Expect = 6e-45 Identities = 297/425 (70%), Gaps = 32/425 (8%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCT-TCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 ||||||||||| ||| | || || | ||||||| ||||||| ||||||||| ||||||| Sbjct 3208958 TTTACAACCCGTAGGGCAGTCATCCTCCACGCGGGATGGCTGGATCAGGCTTTCGCCCAT 3209017 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 ||| ||||||||| |||||||||||||||||||||| || |||||||||||| || ||| Sbjct 3209018 TGTCCAATATTCCTTACTGCTGCCTCCCGTAGGAGTCGGGTCCGTGTCTCAGTACCCGTG 3209077 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 ||| ||||| |||||| || |||| ||||| |||| ||| ||| ||||| || Sbjct 3209078 TGGGGGGTCACGCTCTCACGCCCCCTAGCTATCGTAGCCTTGGTAAGCCGTTACCTTACC 3209137 Query 184 AACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTG 243 ||||||||||| || | ||||| |||| || || | | | | Sbjct 3209138 AACTAGCTAATAGCACGCACGCTCATCTCATAGCGA------CGGATCTTTAATTATAAA 3209191 Query 244 GTCTTGCGAC--------GTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTC 295 || ||| || | ||| || |||| | | |||||| | || ||| |||||| Sbjct 3209192 GTGATGCCACTTCATAATGCCATGGGGCATTAATCCCAGTTTCCCGGGGCTATTCCCCTC 3209251 Query 296 CATCAGGCAG-TTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAG-----CGAAGCA 349 || ||| || || | | | |||||||||||| |||| || ||| ||||| | Sbjct 3209252 TATGAGGTAGATTGCGTACGCGTTACTCACCCGTGCGCCGCTGTCCAGTCTTCCGAAGAA 3209311 Query 350 GCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAAT 409 || || || || ||||||||||||| ||| |||| |||| |||||||| Sbjct 3209312 --AACCTTCT---------CGCTCGACTTGCATGTATTAAGCCTCCCGCTAGCGTTCATC 3209360 Query 410 CTGAG 414 ||||| Sbjct 3209361 CTGAG 3209365 Score = 187 bits (206), Expect = 6e-45 Identities = 297/425 (70%), Gaps = 32/425 (8%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCT-TCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 ||||||||||| ||| | || || | ||||||| ||||||| ||||||||| ||||||| Sbjct 5223675 TTTACAACCCGTAGGGCAGTCATCCTCCACGCGGGATGGCTGGATCAGGCTTTCGCCCAT 5223616 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 ||| ||||||||| |||||||||||||||||||||| || |||||||||||| || ||| Sbjct 5223615 TGTCCAATATTCCTTACTGCTGCCTCCCGTAGGAGTCGGGTCCGTGTCTCAGTACCCGTG 5223556 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 ||| ||||| |||||| || |||| ||||| |||| ||| ||| ||||| || Sbjct 5223555 TGGGGGGTCACGCTCTCACGCCCCCTAGCTATCGTAGCCTTGGTAAGCCGTTACCTTACC 5223496 Query 184 AACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTG 243 ||||||||||| || | ||||| |||| || || | | | | Sbjct 5223495 AACTAGCTAATAGCACGCACGCTCATCTCATAGCGA------CGGATCTTTAATTATAAA 5223442 Query 244 GTCTTGCGAC--------GTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTC 295 || ||| || | ||| || |||| | | |||||| | || ||| |||||| Sbjct 5223441 GTGATGCCACTTCATAATGCCATGGGGCATTAATCCCAGTTTCCCGGGGCTATTCCCCTC 5223382 Query 296 CATCAGGCAG-TTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAG-----CGAAGCA 349 || ||| || || | | | |||||||||||| |||| || ||| ||||| | Sbjct 5223381 TATGAGGTAGATTGCGTACGCGTTACTCACCCGTGCGCCGCTGTCCAGTCTTCCGAAGAA 5223322 Query 350 GCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAAT 409 || || || || ||||||||||||| ||| |||| |||| |||||||| Sbjct 5223321 --AACCTTCT---------CGCTCGACTTGCATGTATTAAGCCTCCCGCTAGCGTTCATC 5223273 Query 410 CTGAG 414 ||||| Sbjct 5223272 CTGAG 5223268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222391052032