Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladosiphon_20okamuranus_20[genbank_20GCA_5F001742925.1_202016-08- 18] 732 sequences; 169,730,751 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq19 381 2e-103 seq1 372 1e-100 seq5 363 5e-98 seq2 338 2e-90 seq3 277 6e-72 seq4 235 2e-59 seq558 221 4e-55 seq60 219 1e-54 seq318 215 2e-53 seq457 208 3e-51 seq376 120 1e-24 >seq19 Length=1029424 Score = 381 bits (422), Expect = 2e-103 Identities = 430/566 (76%), Gaps = 15/566 (3%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGAC--AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59 |||||| ||| ||||||| |||||||||| ||||||||||||| | |||||| ||| Sbjct 836098 CGAGTCTGAATAGGGCGATTTAGTCGCTGGGCATAGACCCGAAACCGGGCGATCTATCCA 836039 Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119 || |||| ||||||||| |||||| || ||||||| ||||||||||| |||||||| Sbjct 836038 TGAGCAGGTTGAAGGTGCCGTAACAGGCACTGGAGGACCGAACCCACTGTCGTTGAAAAG 835979 Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179 ||||||||| ||||| | || |||||||||||| ||| | ||| |||||||||||| Sbjct 835978 CCAGGGGATGACTTGTGGATCGGAGTGAAAGGCTAATCAAGCCCGGAGATAGCTGGTTCT 835919 Query 180 CTCCGAAAACTATTTAGGTAGTGCCTC--AAGTATCACCATCGGGGGTAGAGCACTGTTA 237 | |||||| |||||||||||| ||||| | | || |||| ||||||||||||||||| Sbjct 835918 CCCCGAAAGCTATTTAGGTAGCGCCTCGGACGAAT-ACCACAGGGGGTAGAGCACTGTTT 835860 Query 238 TGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTT 297 |||||||||||||| ||||||||||| || |||||||||||||| | | ||| | Sbjct 835859 CGGCTAGGGGGTCATCCCGACTTACCAACCCGATGCAAACTCCGAATACCTGTGAGTACT 835800 Query 298 A-CCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGAC 356 | ||| | || | ||| ||||||||| |||||| ||||| || || || ||| Sbjct 835799 ATCCGGGAGACACACGGC--GGGTGCTAACGTCCGTCGTGAAGAGGGAAACAACCCAGAC 835742 Query 357 TATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGAC 416 ||||||||| ||| || | ||| ||||| | ||||| || || ||| |||| Sbjct 835741 CGCCAGCTAAGGTCCCCAAGTACCAGTTAAGTGGGA--AACGATGTGGGAAGGCTCAGAC 835684 Query 417 AGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGT 476 |||||||| |||||||| |||||||||| || |||||||| |||||| ||||||||||| Sbjct 835683 AGCTAGGAGGTTGGCTTAGAAGCAGCCA-TCCTTTAAAGAAAGCGTAATAGCTCACTAGT 835625 Query 477 CGAGGAGTCGGGCGTGGATAAT-AATCGGGTATTAAGTTGTCTACCGAAGCAGTG---GG 532 |||| | | ||| ||| || | |||| | || || |||||||| | | | Sbjct 835624 CGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTCAAACTGGTCACCGAAGCTGCGGCTGC 835565 Query 533 ATCATTTATATGATCGGTAGGGGAGC 558 || ||| |||| ||||||||||| Sbjct 835564 ATACTTTGTATGCGGGGTAGGGGAGC 835539 >seq1 Length=7344524 Score = 372 bits (412), Expect = 1e-100 Identities = 427/564 (76%), Gaps = 14/564 (2%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| ||| ||||||| || | || |||||| ||||||| |||||||| ||||| Sbjct 3206615 CGAGTCTGAATAGGGCGAGAGCTAGTAGGGGTAGACGCGAAACCCGGTGATCTATCCATG 3206556 Query 62 GCCAGGATGAAGGTGCGGTAA-CACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 | |||| ||||||| | || | | ||||||| ||||||| |||||||||||| Sbjct 3206555 GGCAGGTTGAAGGTTGGATAGTCTCCAACTGGAGGACCGAACCGGTACATGTTGAAAAAT 3206496 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 |||||| |||||| |||||||||||||| || |||||| ||| |||||| || ||| Sbjct 3206495 GTTCGGATGACCTGTGGATAGGGGTGAAAGGCCAATCAAACTGGGAGATAGCTCGTACTC 3206436 Query 181 TCCGAAAACTATTTAGGTAGTGCCTC---AAGTATCACCATCGGGGGTAGAGC-ACTGTT 236 |||||| |||||||| || | ||| | | || || |||||||| || | | Sbjct 3206435 CCCGAAATGCATTTAGGTGCAGCGTTGGGAAGAGTGTC-AT-GGAGGTAGAGCTACCGAT 3206378 Query 237 ATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTT 296 | |||||||||| | | | | |||||| || | | |||||||||||| ||| | || Sbjct 3206377 AGGGCTAGGGGG-CTTCACCGCCTACCAACCCCTGACGAACTCCGAATGC-CATGACATT 3206320 Query 297 TACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGAC 356 | | | ||||||| ||||||||||||||| | || ||||| || || || ||| Sbjct 3206319 GCAC-CAGCAGTGAGGCAGTGGGTGCTAAGGTCCATTGCCAAGAGGGAAACAACCCAGAC 3206261 Query 357 TATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGAC 416 ||||||||||| ||| || || ||||||| || ||||| || | ||||||||| Sbjct 3206260 CATCAGCTAAGGTCCCCAAGTGTATACTAAGTTGAATGAACGATGTGAGGATGCTAAGAC 3206201 Query 417 AGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGT 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3206200 AGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGT 3206141 Query 477 CGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTGGGATCA 536 |||| || ||| ||| |||| ||||| ||||||| | |||||||| ||||||| Sbjct 3206140 CGAGCGTTCTTGCGCGGAAAATACTCGGGCATTAAGTATACCACCGAAGCTATGGGATC- 3206082 Query 537 TTTATATGATCGGTAGGGGAGCAT 560 | ||||||||||||||||| Sbjct 3206081 ---GCAAGATCGGTAGGGGAGCAT 3206061 Score = 372 bits (412), Expect = 1e-100 Identities = 427/564 (76%), Gaps = 14/564 (2%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| ||| ||||||| || | || |||||| ||||||| |||||||| ||||| Sbjct 5226434 CGAGTCTGAATAGGGCGAGAGCTAGTAGGGGTAGACGCGAAACCCGGTGATCTATCCATG 5226493 Query 62 GCCAGGATGAAGGTGCGGTAA-CACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 | |||| ||||||| | || | | ||||||| ||||||| |||||||||||| Sbjct 5226494 GGCAGGTTGAAGGTTGGATAGTCTCCAACTGGAGGACCGAACCGGTACATGTTGAAAAAT 5226553 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 |||||| |||||| |||||||||||||| || |||||| ||| |||||| || ||| Sbjct 5226554 GTTCGGATGACCTGTGGATAGGGGTGAAAGGCCAATCAAACTGGGAGATAGCTCGTACTC 5226613 Query 181 TCCGAAAACTATTTAGGTAGTGCCTC---AAGTATCACCATCGGGGGTAGAGC-ACTGTT 236 |||||| |||||||| || | ||| | | || || |||||||| || | | Sbjct 5226614 CCCGAAATGCATTTAGGTGCAGCGTTGGGAAGAGTGTC-AT-GGAGGTAGAGCTACCGAT 5226671 Query 237 ATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTT 296 | |||||||||| | | | | |||||| || | | |||||||||||| ||| | || Sbjct 5226672 AGGGCTAGGGGG-CTTCACCGCCTACCAACCCCTGACGAACTCCGAATGC-CATGACATT 5226729 Query 297 TACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGAC 356 | | | ||||||| ||||||||||||||| | || ||||| || || || ||| Sbjct 5226730 GCAC-CAGCAGTGAGGCAGTGGGTGCTAAGGTCCATTGCCAAGAGGGAAACAACCCAGAC 5226788 Query 357 TATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGAC 416 ||||||||||| ||| || || ||||||| || ||||| || | ||||||||| Sbjct 5226789 CATCAGCTAAGGTCCCCAAGTGTATACTAAGTTGAATGAACGATGTGAGGATGCTAAGAC 5226848 Query 417 AGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGT 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5226849 AGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGT 5226908 Query 477 CGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTGGGATCA 536 |||| || ||| ||| |||| ||||| ||||||| | |||||||| ||||||| Sbjct 5226909 CGAGCGTTCTTGCGCGGAAAATACTCGGGCATTAAGTATACCACCGAAGCTATGGGATC- 5226967 Query 537 TTTATATGATCGGTAGGGGAGCAT 560 | ||||||||||||||||| Sbjct 5226968 ---GCAAGATCGGTAGGGGAGCAT 5226988 >seq5 Length=3486096 Score = 363 bits (402), Expect = 5e-98 Identities = 374/482 (78%), Gaps = 9/482 (2%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| || |||||| |||||| | ||||||||||||| | |||||| |||| Sbjct 693089 CGAGTCTTAATAGGGCGTTTAGTCGCATGCAATAGACCCGAAACCGGGCGATCTATCCAT 693148 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 || |||| ||||||| |||||| ||||||| |||||| |||| |||||||||||| Sbjct 693149 GGGCAGGTTGAAGGTTGAGTAACATCAACTGGAGGACCGAACACACTTATGTTGAAAAAT 693208 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 ||| ||||| |||||| | || |||||||||||| ||| | ||| ||||||||||||| Sbjct 693209 GAGGTGATGACCTGTGGATCGGAGTGAAAGGCTAATCAAGCCCGGAGATAGCTGGTTCTC 693268 Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATCGGGGGTAGAGCACTGTTATGG 240 ||||| |||||||||||| |||||| ||||||||| ||||||||||||||||| || Sbjct 693269 CTCGAAAGCTATTTAGGTAGCGCCTCATGTATCACCACTGGGGGTAGAGCACTGTTTCGG 693328 Query 241 CTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTTACC 300 |||||||||||| ||||||||||| || |||||||||||||| | | ||| | | Sbjct 693329 CTAGGGGGTCATCCCGACTTACCAACCCGATGCAAACTCCGAATACCAGTGAGTGCAATC 693388 Query 301 GCGGGAG--TGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTA 358 ||||| | ||| ||||||||| |||||| || ||| || || || ||| Sbjct 693389 ATGGGAGACACACGGC--GGGTGCTAACGTCCGTCGTGGAAAGGGAAACAACCCAGACCG 693446 Query 359 TCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAG 418 |||||||||| ||| ||| | | ||||| | ||||| || || ||| |||||| Sbjct 693447 TCAGCTAAGGTCCCTAAACTA-TGTTAAGTGGGA--AACGATGTGGGAAGGCTCAGACAG 693503 Query 419 CTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCG 478 |||||| |||||||| |||||||||| || |||||||| |||||| ||||||||||||| Sbjct 693504 CTAGGAGGTTGGCTTAGAAGCAGCCA-TCCTTTAAAGAAAGCGTAATAGCTCACTAGTCG 693562 Query 479 AG 480 || Sbjct 693563 AG 693564 >seq2 Length=6328565 Score = 338 bits (374), Expect = 2e-90 Identities = 369/480 (77%), Gaps = 10/480 (2%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGAC-AGT-CGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59 |||||| ||| |||||| ||| || ||| | ||||||||||||| ||||||||| ||| Sbjct 5617262 CGAGTCTGAATAGGGCGTTTAGTTCGTTGGAT-TAGACCCGAAACCGAGTGATCTAGCCA 5617204 Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119 |||||||| ||||||||||||||||||| ||||||| |||||||||| |||||||||| Sbjct 5617203 TGGCCAGGTTGAAGGTGCGGTAACACGCACTGGAGGACCGAACCCACGCCTGTTGAAAAA 5617144 Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179 | ||||||||||||||| |||||||||||||| || |||||| |||||||||||||||| Sbjct 5617143 GTCGGGGATGAGCTGTGGCTAGGGGTGAAAGGCCAATCAAACTCGGAAATAGCTGGTTCT 5617084 Query 180 CTCCGAAAACTATTTAGGTAGTGCCTC--AAGTATCACCATCGGGGGTAGAGCACTGTTA 237 | ||||| |||||||||||| || || | | || || ||||||||||||||||| Sbjct 5617083 CCGCGAAATCTATTTAGGTAGAGCGTCGGATGAAT-ACTCTCGGGGGTAGAGCACTGGAT 5617025 Query 238 TGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTT 297 ||||| |||| | | || ||||| | || |||||||||||| | | ||| | Sbjct 5617024 GGGCTATGGGGGCTTACCGCCTTACTGATCCTAACCAAACTCCGAATACCGAGAAGTACT 5616965 Query 298 ACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACT 357 | | ||| || | |||||||||| |||| | |||||| || || || ||| Sbjct 5616964 ATC-CGGCAGACACACAGTGGGTGCTAACGTCCATTGTGGAGAGGGAAACAACCCTGACC 5616906 Query 358 ATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACA 417 ||| ||||| ||| || | | ||||||| | || || || | | | || ||| Sbjct 5616905 GCCAGTTAAGGTCCCTAAGTTATGGCTAAGTGGGA--AAGGATGTAGAACTCCCAAAACA 5616848 Query 418 GCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTC 477 | ||||||||||||| |||||||||| ||||||||||| ||||||||||||||| ||| Sbjct 5616847 ACCAGGATGTTGGCTTAGAAGCAGCCA-TCATTTAAAGAAAGCGTAACAGCTCACTGGTC 5616789 Score = 338 bits (374), Expect = 2e-90 Identities = 369/480 (77%), Gaps = 10/480 (2%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGAC-AGT-CGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59 |||||| ||| |||||| ||| || ||| | ||||||||||||| ||||||||| ||| Sbjct 6275503 CGAGTCTGAATAGGGCGTTTAGTTCGTTGGAT-TAGACCCGAAACCGAGTGATCTAGCCA 6275561 Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119 |||||||| ||||||||||||||||||| ||||||| |||||||||| |||||||||| Sbjct 6275562 TGGCCAGGTTGAAGGTGCGGTAACACGCACTGGAGGACCGAACCCACGCCTGTTGAAAAA 6275621 Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179 | ||||||||||||||| |||||||||||||| || |||||| |||||||||||||||| Sbjct 6275622 GTCGGGGATGAGCTGTGGCTAGGGGTGAAAGGCCAATCAAACTCGGAAATAGCTGGTTCT 6275681 Query 180 CTCCGAAAACTATTTAGGTAGTGCCTC--AAGTATCACCATCGGGGGTAGAGCACTGTTA 237 | ||||| |||||||||||| || || | | || || ||||||||||||||||| Sbjct 6275682 CCGCGAAATCTATTTAGGTAGAGCGTCGGATGAAT-ACTCTCGGGGGTAGAGCACTGGAT 6275740 Query 238 TGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTT 297 ||||| |||| | | || ||||| | || |||||||||||| | | ||| | Sbjct 6275741 GGGCTATGGGGGCTTACCGCCTTACTGATCCTAACCAAACTCCGAATACCGAGAAGTACT 6275800 Query 298 ACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACT 357 | | ||| || | |||||||||| |||| | |||||| || || || ||| Sbjct 6275801 ATC-CGGCAGACACACAGTGGGTGCTAACGTCCATTGTGGAGAGGGAAACAACCCTGACC 6275859 Query 358 ATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACA 417 ||| ||||| ||| || | | ||||||| | || || || | | | || ||| Sbjct 6275860 GCCAGTTAAGGTCCCTAAGTTATGGCTAAGTGGGA--AAGGATGTAGAACTCCCAAAACA 6275917 Query 418 GCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTC 477 | ||||||||||||| |||||||||| ||||||||||| ||||||||||||||| ||| Sbjct 6275918 ACCAGGATGTTGGCTTAGAAGCAGCCA-TCATTTAAAGAAAGCGTAACAGCTCACTGGTC 6275976 >seq3 Length=4400433 Score = 277 bits (306), Expect = 6e-72 Identities = 405/563 (72%), Gaps = 16/563 (3%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGAC--AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59 |||||| ||| |||||||| ||| | | |||||||||| ||||||||||| | Sbjct 2143414 CGAGTCTGAATAGGGCGACTGAGTATGTAGCATTAGACCCGAAGGCAAGTGATCTAGGTA 2143473 Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119 ||| |||| ||||||||| |||||| || ||||||| ||||||| | |||||||| Sbjct 2143474 TGGGCAGGGTGAAGGTGCAGTAACATGCACTGGAGGCCCGAACCGTTGCACGTTGAAAAG 2143533 Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179 | |||||| ||||| |||||||||||||| || |||||||| |||||||||||| Sbjct 2143534 TGCTCGGATGACCTGTGCCTAGGGGTGAAAGGCCAATCAAACTTGCTGATAGCTGGTTCT 2143593 Query 180 CTCCGAAAACTATTTAGGTAGTGCCTCAA--GTATCACCATCGGGGGTAGAGCACTGTTA 237 | ||||| |||||||||||| || || | | || || ||||||||||||||||| Sbjct 2143594 CCGCGAAATCTATTTAGGTAGAGCGTCGATCGAAT-ACTCTCGGGGGTAGAGCACTGACT 2143652 Query 238 TGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGT-TT 296 ||||||||| | || |||||||||| | |||||||||||| | | ||| | Sbjct 2143653 GGGCTAGGGGTCCTCACCGGATTACCAAACCTTATCAAACTCCGAATACCGAGAAGTACT 2143712 Query 297 TACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGAC 356 | || || | ||| ||||||||| |||||| |||||| || || || ||| Sbjct 2143713 AATCGGCAGACACACGGC--GGGTGCTAACGTCCGTCGTGGAGAGGGAAACAACCCTGAC 2143770 Query 357 TATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGAC 416 | || ||||| ||| |||| | ||||||| | || || || ||||||| ||| Sbjct 2143771 CACCAATTAAGGTCCCCAAATAATGGCTAAGTGTGA--AAGGATGTGGGATTGCTTTGAC 2143828 Query 417 AGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGT 476 | |||| |||||||| |||||||||| || |||||||| ||||||||||||||| | Sbjct 2143829 AATGAGGAGGTTGGCTTAGAAGCAGCCA-TCCTTTAAAGAAAGCGTAACAGCTCACTCAT 2143887 Query 477 CGAGGAGTCGGGCGTGGATAAT-AATCGGGTATTAAGTTGTCTACCGAAGCAGTGGGATC 535 | || || ||| || ||| | |||| | ||| | ||||||| ||||| || Sbjct 2143888 CAAGCGATCCTGCGCCGAAAATGTAACGGGGCTAAAGCCATTTACCGAAATTGTGGGCTC 2143947 Query 536 ATTTATATGATCGGTAGGGGAGC 558 || || |||||| ||||| Sbjct 2143948 ----GTAAGAGCGGTAGCGGAGC 2143966 >seq4 Length=3599618 Score = 235 bits (260), Expect = 2e-59 Identities = 348/484 (72%), Gaps = 12/484 (2%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGT---AGACCCGAAACCAAG-TGATCTACC 57 |||||||||| |||||||| | |||| ||| ||||||||| | || ||||||||| Sbjct 2865089 CGAGTCCGAATAGGGCGACCATAGCTGCATGTGCTAGACCCGAAGCGGAGGTGATCTACC 2865030 Query 58 CATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAA 117 | |||||||| ||||| ||| | || | || ||| ||||||| |||||||||| Sbjct 2865029 CTTGGCCAGGTTGAAGCGTAGGTGATACTACGTGAAGGACCGAACCGGTGAATGTTGAAA 2864970 Query 118 AATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTT 177 |||| |||||||||| ||||||| |||||||||||| ||||| | |||||||||| Sbjct 2864969 AATTCTCGGATGAGCTGAGGGTAGGAGTGAAAGGCTAATCAAACCCCGTGATAGCTGGTT 2864910 Query 178 CTCTCCGAAAACTATTTAGGTAGTGCCTCAAGT-ATCACCATCGGGGGTAGAGCACTGTT 236 ||| ||||| ||| |||| || | || | | | ||||||||||||||| Sbjct 2864909 CTCCTCGAAATGCATTGAGGTGCAGCGTTGCGTGCTGATGAGTGGGGGTAGAGCACTGAC 2864850 Query 237 ATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTT 296 | |||||||||| ||| | | |||||| || | |||||||||||| | ||| | Sbjct 2864849 AGGGCTAGGGGG-CATACCCGCCTACCAACCCCTATCAAACTCCGAATAC-CATTCAATG 2864792 Query 297 TACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGAC 356 | ||| | |||||| |||| | |||| | | | ||| ||| || || || || Sbjct 2864791 GAGCGCAGCAGTGAGACGGTGGGGGATAAGCTTCATCGTCGAAAGGGAAACAACCCTGAT 2864732 Query 357 TATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGAC 416 | ||||||||| || ||| | ||||||| | || || || ||| | |||| Sbjct 2864731 CAGCAGCTAAGGTGCCTAAACCA-TGCTAAGTGGA---AAGGAGGTGGAATTTCATAGAC 2864676 Query 417 AGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGT 476 || ||||||||||||| |||||||||| |||||||| ||||||||| |||| ||| | Sbjct 2864675 AGTGAGGATGTTGGCTTAGAAGCAGCCA-CCATTTAAAAAGTGCGTAATAGCTTACTCAT 2864617 Query 477 CGAG 480 |||| Sbjct 2864616 CGAG 2864613 Score = 235 bits (260), Expect = 2e-59 Identities = 348/484 (72%), Gaps = 12/484 (2%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGT---AGACCCGAAACCAAG-TGATCTACC 57 |||||||||| |||||||| | |||| ||| ||||||||| | || ||||||||| Sbjct 3217529 CGAGTCCGAATAGGGCGACCATAGCTGCATGTGCTAGACCCGAAGCGGAGGTGATCTACC 3217470 Query 58 CATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAA 117 | |||||||| ||||| ||| | || | || ||| ||||||| |||||||||| Sbjct 3217469 CTTGGCCAGGTTGAAGCGTAGGTGATACTACGTGAAGGACCGAACCGGTGAATGTTGAAA 3217410 Query 118 AATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTT 177 |||| |||||||||| ||||||| |||||||||||| ||||| | |||||||||| Sbjct 3217409 AATTCTCGGATGAGCTGAGGGTAGGAGTGAAAGGCTAATCAAACCCCGTGATAGCTGGTT 3217350 Query 178 CTCTCCGAAAACTATTTAGGTAGTGCCTCAAGT-ATCACCATCGGGGGTAGAGCACTGTT 236 ||| ||||| ||| |||| || | || | | | ||||||||||||||| Sbjct 3217349 CTCCTCGAAATGCATTGAGGTGCAGCGTTGCGTGCTGATGAGTGGGGGTAGAGCACTGAC 3217290 Query 237 ATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTT 296 | |||||||||| ||| | | |||||| || | |||||||||||| | ||| | Sbjct 3217289 AGGGCTAGGGGG-CATACCCGCCTACCAACCCCTATCAAACTCCGAATAC-CATTCAATG 3217232 Query 297 TACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGAC 356 | ||| | |||||| |||| | |||| | | | ||| ||| || || || || Sbjct 3217231 GAGCGCAGCAGTGAGACGGTGGGGGATAAGCTTCATCGTCGAAAGGGAAACAACCCTGAT 3217172 Query 357 TATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGAC 416 | ||||||||| || ||| | ||||||| | || || || ||| | |||| Sbjct 3217171 CAGCAGCTAAGGTGCCTAAACCA-TGCTAAGTGGA---AAGGAGGTGGAATTTCATAGAC 3217116 Query 417 AGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGT 476 || ||||||||||||| |||||||||| |||||||| ||||||||| |||| ||| | Sbjct 3217115 AGTGAGGATGTTGGCTTAGAAGCAGCCA-CCATTTAAAAAGTGCGTAATAGCTTACTCAT 3217057 Query 477 CGAG 480 |||| Sbjct 3217056 CGAG 3217053 >seq558 Length=35882 Score = 221 bits (244), Expect = 4e-55 Identities = 172/203 (85%), Gaps = 3/203 (1%) Strand=Plus/Minus Query 34 AGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGA 93 |||||||||||| ||||||||| |||| ||||||||||||||||||||||||| ||||| Sbjct 13768 AGACCCGAAACCGAGTGATCTAGGCATGACCAGGATGAAGGTGCGGTAACACGCACTGGA 13709 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 ||||||||||||| |||||||||| |||||||| |||| |||||||||||||| Sbjct 13708 GGTCCGAACCCACACCTGTTGAAAAAGGTCGGGATGAGTTGTGCCTAGGGGTGAAAGGCC 13649 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCA--AGTA 211 || |||||| ||| |||||||||||||| ||||| |||||||||||| || ||| | | Sbjct 13648 AATCAAACTCGGAGATAGCTGGTTCTCTGCGAAATCTATTTAGGTAGAGCGTCATCCGAA 13589 Query 212 TCACCATCGGGGGTAGAGCACTG 234 | ||| ||||||||||||||| Sbjct 13588 T-ACCCCGGGGGGTAGAGCACTG 13567 >seq60 Length=599436 Score = 219 bits (242), Expect = 1e-54 Identities = 356/503 (71%), Gaps = 12/503 (2%) Strand=Plus/Plus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAG 94 |||||||| || ||||||| ||||||||||||||||| | ||||| || ||||| Sbjct 37921 GACCCGAACCCGGATGATCTAACCATGGCCAGGATGAAGCTTAGGTAATACTAAGTGGAG 37980 Query 95 GTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTA 154 |||||||| ||| |||||||||||| || |||||||||||| ||||||||||| || | Sbjct 37981 GTCCGAACTGACTGATGTTGAAAAATCAGCAGATGAGCTGTGGTTAGGGGTGAAATGCCA 38040 Query 155 AACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCA 214 | | || | ||| |||||||||||| |||||| | |||||| || ||| | | Sbjct 38041 ATCGAATTCGGAGCTAGCTGGTTCTCCCCGAAATGTGTTTAGGCGCAGCGGTTAGTGTTA 38100 Query 215 CCAT-CGGGGGTAGAGCACTGTTATGGCTAGGG--GGTCATTGCGACTTACCAAACCATT 271 | |||||| ||||||| | || ||| ||| ||| || ||||||| | | Sbjct 38101 TAGTGTAGGGGTAAAGCACTGCTTCGGTGCGGGCTGGTAATT-CG--GTACCAAATCGAT 38157 Query 272 GCAAACTCCGAATGCGCATCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCG 331 |||||||| |||| | || | || | ||| || ||||| | |||| ||| Sbjct 38158 GCAAACTCTGAAT--ACTACATGTATAGCTAACCAGTAAGACTATGGGGGATAAGCTCCA 38215 Query 332 TGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAA 391 | | ||||| || | || || | ||||||||||||| |||| | |||||| Sbjct 38216 TTGTCAAGAGGGAAACAGCCCAGATCACCAGCTAAGGCCCCTAAATAATTACTAAGT--G 38273 Query 392 ACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTT 451 | || || || || || | ||| | |||| ||| |||| ||||||| || || ||| Sbjct 38274 GCAAAGGAGGTGGGAAGACTTAAACAACCAGGAGGTTTGCTTAGAAGCAG-CAATCCTTT 38332 Query 452 AAAGAGTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAA 511 ||||||||||||| |||||||| |||||| | || ||| || ||| | |||| | ||| Sbjct 38333 AAAGAGTGCGTAATAGCTCACTGGTCGAGTAATCCTGCGCCGAAAATGAACGGG-ACTAA 38391 Query 512 GTTGTCTACCGAAGCAGTGGGAT 534 || | | ||||||| ||| ||| Sbjct 38392 GTAATTTGCCGAAGCTGTGAGAT 38414 Score = 219 bits (242), Expect = 1e-54 Identities = 356/503 (71%), Gaps = 12/503 (2%) Strand=Plus/Minus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAG 94 |||||||| || ||||||| ||||||||||||||||| | ||||| || ||||| Sbjct 89828 GACCCGAACCCGGATGATCTAACCATGGCCAGGATGAAGCTTAGGTAATACTAAGTGGAG 89769 Query 95 GTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTA 154 |||||||| ||| |||||||||||| || |||||||||||| ||||||||||| || | Sbjct 89768 GTCCGAACTGACTGATGTTGAAAAATCAGCAGATGAGCTGTGGTTAGGGGTGAAATGCCA 89709 Query 155 AACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCA 214 | | || | ||| |||||||||||| |||||| | |||||| || ||| | | Sbjct 89708 ATCGAATTCGGAGCTAGCTGGTTCTCCCCGAAATGTGTTTAGGCGCAGCGGTTAGTGTTA 89649 Query 215 CCAT-CGGGGGTAGAGCACTGTTATGGCTAGGG--GGTCATTGCGACTTACCAAACCATT 271 | |||||| ||||||| | || ||| ||| ||| || ||||||| | | Sbjct 89648 TAGTGTAGGGGTAAAGCACTGCTTCGGTGCGGGCTGGTAATT-CG--GTACCAAATCGAT 89592 Query 272 GCAAACTCCGAATGCGCATCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCG 331 |||||||| |||| | || | || | ||| || ||||| | |||| ||| Sbjct 89591 GCAAACTCTGAAT--ACTACATGTATAGCTAACCAGTAAGACTATGGGGGATAAGCTCCA 89534 Query 332 TGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAA 391 | | ||||| || | || || | ||||||||||||| |||| | |||||| Sbjct 89533 TTGTCAAGAGGGAAACAGCCCAGATCACCAGCTAAGGCCCCTAAATAATTACTAAGT--G 89476 Query 392 ACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTT 451 | || || || || || | ||| | |||| ||| |||| ||||||| || || ||| Sbjct 89475 GCAAAGGAGGTGGGAAGACTTAAACAACCAGGAGGTTTGCTTAGAAGCAG-CAATCCTTT 89417 Query 452 AAAGAGTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAA 511 ||||||||||||| |||||||| |||||| | || ||| || ||| | |||| | ||| Sbjct 89416 AAAGAGTGCGTAATAGCTCACTGGTCGAGTAATCCTGCGCCGAAAATGAACGGG-ACTAA 89358 Query 512 GTTGTCTACCGAAGCAGTGGGAT 534 || | | ||||||| ||| ||| Sbjct 89357 GTAATTTGCCGAAGCTGTGAGAT 89335 >seq318 Length=132058 Score = 215 bits (238), Expect = 2e-53 Identities = 380/543 (70%), Gaps = 18/543 (3%) Strand=Plus/Plus Query 4 AGTCCGAACAGGGCGA--CAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 ||||| |||||||| | ||| || | | |||||||| || |||||||| ||||| Sbjct 47331 AGTCCTCACAGGGCGTTTCCGTCACTTCTTATGGACCCGAACCCGGGTGATCTAACCATG 47390 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 |||||||||||| | |||||||| |||| | ||||||||| |||||||||||| Sbjct 47391 GCCAGGATGAAGCTTGGGTAACACCAAGTGGAAGACCGAACCCATCGATGTTGAAAAATC 47450 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 |||||||| ||||| ||||||||||| || || | |||| ||| |||||||||||| Sbjct 47451 GTGGGATGAGTTGTGGTTAGGGGTGAAATGCCAATCGAACTCGGAGCTAGCTGGTTCTCC 47510 Query 182 CCGAAAACTATTTAG--GTAGTGCCTCAAGTATCACCATC--GGGGGTAGAGCACTGTTA 237 |||||| || || | || | | | | || | | | |||||| ||||||| || Sbjct 47511 CCGAAATGCGTTGAGGCGCAGCGGTTGATGAATGAACTGCCTAGGGGTAAAGCACTG-TA 47569 Query 238 TGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC---GCATCAGT 294 | | | ||| | | | ||||||| | | |||||||| |||| | | || | | Sbjct 47570 TCGGTGCGGGCTGCGAGAGCGGTACCAAATCGTAGCAAACTCTGAATACTAGGTATGAAT 47629 Query 295 T--TTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCC 352 | | || | | || || |||| | |||| ||| | ||||||| || | || Sbjct 47630 TGCCATCAGCCAGTGGGACGG--TGGGGGATAAGCTCCATCGTCGAGAGGGAAACAGCCC 47687 Query 353 GGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTA 412 || | ||||||||||||| |||||| ||| ||| || || || || | |||| Sbjct 47688 AGATCACCAGCTAAGGCCCCAAAATGATCGCTCAGTGGAA--AAGGAGGTGAAAATGCTG 47745 Query 413 AGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCAC 472 | ||||| || | ||| |||| ||||||| || || |||||||||||||||| ||||||| Sbjct 47746 AAACAGCCAGAAGGTTCGCTTAGAAGCAG-CAATCCTTTAAAGAGTGCGTAATAGCTCAC 47804 Query 473 TAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTGGG 532 | || ||| || ||| || ||| |||| | |||| ||| ||||||| ||||| Sbjct 47805 TGGTAGAGCGTTCTTGCGCCGAAAATGTACGGG-ACTAAGCGATCTGCCGAAGCTGTGGG 47863 Query 533 ATC 535 || Sbjct 47864 CTC 47866 >seq457 Length=62169 Score = 208 bits (230), Expect = 3e-51 Identities = 198/251 (79%), Gaps = 3/251 (1%) Strand=Plus/Plus Query 33 TAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGG 92 ||||||||||||||||||||||| ||||| |||| ||||||| |||||||| |||| Sbjct 44097 TAGACCCGAAACCAAGTGATCTAGCCATGAGCAGGTTGAAGGTTGGGTAACACCAACTGG 44156 Query 93 AGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGC 152 ||| ||||||||| | |||| || | ||||||| ||||| |||||||||||||| Sbjct 44157 AGGACCGAACCCATACACGTTGCAATGTGTCGGGATGACTTGTGGCTAGGGGTGAAAGGC 44216 Query 153 TAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAA--GT 210 || ||||||||||||||||||||||||| ||||| |||||||||||| || |||| | Sbjct 44217 CAATCAAACTTGGAAATAGCTGGTTCTCTGCGAAATCTATTTAGGTAGAGCGTCAATCGA 44276 Query 211 ATCACCATCGGGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGACTTACCAAACCAT 270 || || ||||||||||||||| ||||| |||||| |||||||| | || Sbjct 44277 AT-ACTCCGGGGGGTAGAGCACTGGATGGGCTATGGGGTCCCAACGACTTACTGATCCTA 44335 Query 271 TGCAAACTCCG 281 ||||||||| Sbjct 44336 ACCAAACTCCG 44346 >seq376 Length=97167 Score = 120 bits (132), Expect = 1e-24 Identities = 155/210 (74%), Gaps = 8/210 (4%) Strand=Plus/Plus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAG 94 |||||||||| |||||||||| | || ||||| |||| | | |||||||| | |||| Sbjct 71527 GACCCGAAACTAAGTGATCTAGCTATCACCAGGTTGAAAGGGAGGTAACACTTTCAGGAG 71586 Query 95 GTCCGAACCCACTAATGTTGAAAAATTAGG---GGATGAGCTGTGGGTAGGGGTGAAAGG 151 | ||||||| ||| | | |||| ||||||| |||| ||||||||||| | Sbjct 71587 GACCGAACCGGTGTCTGTGGCAG---TAGGCACGGATGAGTGGTGGCTAGGGGTGAAAAG 71643 Query 152 CTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGC-CTCAAGT 210 | || | ||||| || |||||||||| | | ||||| ||||| |||||| || || || Sbjct 71644 CCAATCGAACTTAGAGATAGCTGGTTTTTTGCGAAATCTATTCAGGTAGAGCGCTATTGT 71703 Query 211 ATCACCATCGGGGGTAGAGCACTGTTATGG 240 | | | ||||||||||||||| ||||| Sbjct 71704 AAAAAAAAGGGGGGTAGAGCACTG-TATGG 71732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689587632128