Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ectocarpus_20siliculosus_20[genbank_20GCA_5F000310025.1_202010-06- 24] 1,270 sequences; 195,810,619 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq583 129 3e-28 seq555 129 3e-28 >seq583 Length=2047 Score = 129 bits (142), Expect = 3e-28 Identities = 101/119 (85%), Gaps = 4/119 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA--AAATGATAACATCGC 58 |||||||||||||||||||||||| ||||||| || ||||| |||| |||| | Sbjct 1882 GAACCCAAAGACTTTGATTTCTCGGAAGGTGCTGACGGAGTCCTTAAAT--TAACGACCG 1825 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 || ||||||||||||||||||||| |||||||||||||| ||||||| ||| ||||||| Sbjct 1824 CCAATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGATGGTATCTAATCATCTTCGA 1766 >seq555 Length=2081 Score = 129 bits (142), Expect = 3e-28 Identities = 101/119 (85%), Gaps = 4/119 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA--AAATGATAACATCGC 58 |||||||||||||||||||||||| ||||||| || ||||| |||| |||| | Sbjct 1901 GAACCCAAAGACTTTGATTTCTCGGAAGGTGCTGACGGAGTCCTTAAAT--TAACGACCG 1844 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 || ||||||||||||||||||||| |||||||||||||| ||||||| ||| ||||||| Sbjct 1843 CCAATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGATGGTATCTAATCATCTTCGA 1785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278396685300