Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ectocarpus_20siliculosus_20[genbank_20GCA_5F000310025.1_202010-06- 24] 1,270 sequences; 195,810,619 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq583 257 3e-66 seq555 257 3e-66 >seq583 Length=2047 Score = 257 bits (284), Expect = 3e-66 Identities = 211/250 (84%), Gaps = 9/250 (4%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGC--TCGAATACATTAGCATG 131 |||||| |||||||||||||||||||||||||||| | || | | ||||||||||||| Sbjct 1519 TTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCTTAGGCCATTGGATACATTAGCATG 1578 Query 132 GAATAATAGAATAGG---ACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATG 188 ||||||| ||||| ||| |||| ||||||||||||||| | | | |||||| Sbjct 1579 GAATAATGAGATAGGGCCACGA-CGGT-CTATTTTGTTGGTTTGCACGTT-GTGGTAATG 1635 Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248 ||||| ||| | || |||||| | |||||||||||||||||||||||||||||||||| Sbjct 1636 ATTAACAGGAACGGTTGGGGGTATTCGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 1695 Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308 || |||||| ||||||||||||||| || ||||||||||||||||||||||| |||||| Sbjct 1696 ATGGAAGACGAACTACTGCGAAAGCATTTACCAAGGATGTTTTCATTAATCA-AGAACGA 1754 Query 309 AAGTTAGGGG 318 |||||||||| Sbjct 1755 AAGTTAGGGG 1764 >seq555 Length=2081 Score = 257 bits (284), Expect = 3e-66 Identities = 211/250 (84%), Gaps = 9/250 (4%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGC--TCGAATACATTAGCATG 131 |||||| |||||||||||||||||||||||||||| | || | | ||||||||||||| Sbjct 1538 TTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCTTAGGCCATTGGATACATTAGCATG 1597 Query 132 GAATAATAGAATAGG---ACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATG 188 ||||||| ||||| ||| |||| ||||||||||||||| | | | |||||| Sbjct 1598 GAATAATGAGATAGGGCCACGA-CGGT-CTATTTTGTTGGTTTGCACGTT-GTGGTAATG 1654 Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248 ||||| ||| | || |||||| | |||||||||||||||||||||||||||||||||| Sbjct 1655 ATTAACAGGAACGGTTGGGGGTATTCGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 1714 Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308 || |||||| ||||||||||||||| || ||||||||||||||||||||||| |||||| Sbjct 1715 ATGGAAGACGAACTACTGCGAAAGCATTTACCAAGGATGTTTTCATTAATCA-AGAACGA 1773 Query 309 AAGTTAGGGG 318 |||||||||| Sbjct 1774 AAGTTAGGGG 1783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915188376960