Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ectocarpus_20siliculosus_20[genbank_20GCA_5F000310025.1_202010-06- 24] 1,270 sequences; 195,810,619 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq875 237 4e-60 >seq875 Length=31036 Score = 237 bits (262), Expect = 4e-60 Identities = 219/273 (80%), Gaps = 21/273 (8%) Strand=Plus/Plus Query 13 GCATCTTCAC-AGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGT 71 |||||||||| | | || | |||||||||||||| | | ||||||||||| | |||| Sbjct 29961 GCATCTTCACGACCTATGT-AATTTCACTGAGTCCCTGTTGGAGACAGCGGGGAAGTCGT 30019 Query 72 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 131 ||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 30020 TACACCATTCATGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTC 30079 Query 132 ATTGTTACGGCCGCCGTTTACCGGGGCTTCGA--TCAAGAGCTTCGCGTTAGCTAACCCC 189 || ||||| ||||||||||||||||| || || |||| |||| | | Sbjct 30080 ATAGTTACAGCCGCCGTTTACCGGGG-TTTGACCTCAA------TGCGTAA-------AC 30125 Query 190 ATCAA---TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGT 246 ||||| || |||| ||||||||||||||| |||| |||||||| ||| ||| || || Sbjct 30126 ATCAAAGCTTTACCTACCGGCACCGGGCAGGTGTCAGTCCCTATACATCCTCTTGCGAGT 30185 Query 247 TTGCAGAGTGCTGTGTTTTTAATAAACAGTCGC 279 | |||||| ||||||||||||||||||||||| Sbjct 30186 TAGCAGAGACCTGTGTTTTTAATAAACAGTCGC 30218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260783987840