Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ectocarpus_20siliculosus_20[genbank_20GCA_5F000310025.1_202010-06- 24] 1,270 sequences; 195,810,619 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq875 230 5e-58 >seq875 Length=31036 Score = 230 bits (254), Expect = 5e-58 Identities = 257/344 (75%), Gaps = 22/344 (6%) Strand=Plus/Plus Query 26 AATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCG 85 |||||||| ||||| | | ||||||| | || ||||||| || ||| ||||||||| Sbjct 29980 AATTTCACTGAGTCCCTGTTGGAGACAGCGGGGAAGTCGTTACACCATTCATGCGGGTCG 30039 Query 86 GAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTA 145 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct 30040 GAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTCATAGTTACAGCCGCCGTTTA 30099 Query 146 CTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCCCCTTAACCTTCCAGCACCG 205 | |||| || | ||| ||| | |||| ||| |||| || |||||| Sbjct 30100 CCGGGGTTTGACCTCAATGCGT---------AAACATCAAAGCTTTACCTACCGGCACCG 30150 Query 206 GGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAA 265 |||||| ||||| |||||||||| |||||||| |||||||| |||||||||||| ||| Sbjct 30151 GGCAGGTGTCAGTCCCTATACATCCTCTTGCGAGTTAGCAGAGACCTGTGTTTTTAATAA 30210 Query 266 ACAGTCGCTTGGGCCTATTCTCTGC----------GGCCTGTCAT--AGACAGGCACCCC 313 ||||||||| || ||| | ||| || || | | | || || Sbjct 30211 ACAGTCGCTACCCCCGATTTTGTGCCAAAAATAAGAGCTTGCGCTCCATATTTTTACTCC 30270 Query 314 TTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTT-AACAA 356 || | || ||||||| | |||||||||||||||||||| ||||| Sbjct 30271 TTATTCCGAAGTTACAGAGTCATTTTGCCGAGTTCCTTCAACAA 30314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062386507520