Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ectocarpus_20siliculosus_20[genbank_20GCA_5F000310025.1_202010-06- 24] 1,270 sequences; 195,810,619 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq875 132 9e-29 >seq875 Length=31036 Score = 132 bits (146), Expect = 9e-29 Identities = 172/234 (74%), Gaps = 9/234 (4%) Strand=Plus/Minus Query 109 ACGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAG 168 |||||||||||| | ||| |||||||||||||||||||||||| |||||||||||||| Sbjct 29794 ACGGGACAGTGTTTGCTGGGTAGTTTGACTGGGGCGGTCGCCTCCTAAAGAGTAACGGAG 29735 Query 169 GCGCCCAAAGATACCCTCAGCT---TGGATGGAAACCATGCGCACAGTGCAAAGGCAAAA 225 || ||||| || |||| || | | ||| | || || ||| || ||||||| Sbjct 29734 GCATACAAAGGTAGGCTCATCTCCCTATAAGGAGA--AT-CG---AGTATAATGGCAAAA 29681 Query 226 GGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCG 285 | || ||||||| | | || || | |||||||| ||||||| | || ||||||| Sbjct 29680 GCCTGCTTGACTGTAAGAAAGACATTTCGATCAGGGACGTAAGTCGGTCATAGTGATCCG 29621 Query 286 GCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | || || ||||| ||| |||| | | ||||||||| ||| | ||||||| Sbjct 29620 GTAGTTCTTTGTGGAAAGGCTATCGCGCAATGGATAAAAGGTACGCCGGGGATA 29567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982387523520