Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ectocarpus_20siliculosus_20[genbank_20GCA_5F000310025.1_202010-06- 24] 1,270 sequences; 195,810,619 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq875 109 6e-22 >seq875 Length=31036 Score = 109 bits (120), Expect = 6e-22 Identities = 119/153 (78%), Gaps = 8/153 (5%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGG-TAATCGGCATCTTCACCGATACTAC--AATTTCA 79 |||||||||| ||||| || || | ||| ||||||||| || ||| ||||||| Sbjct 29930 CGGGGTCTTTCCGTCCAGCTGCAGGATGGTCG-CATCTTCAC-GAC-CTATGTAATTTCA 29986 Query 80 CTGAGCTCACGGTTG-AGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTT 138 ||||| || | |||| |||||| |||||||||| ||| ||||||||||| Sbjct 29987 CTGAG-TCCCTGTTGGAGACAGCGGGGAAGTCGTTACACCATTCATGCGGGTCGGAACTT 30045 Query 139 ACCCGACAAGGAATTTCGCTACCTTAGGACCGT 171 ||||||||||||||||||||||||||||||||| Sbjct 30046 ACCCGACAAGGAATTTCGCTACCTTAGGACCGT 30078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547193267730