Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ectocarpus_20siliculosus_20[genbank_20GCA_5F000310025.1_202010-06- 24] 1,270 sequences; 195,810,619 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq583 93.3 5e-17 seq555 93.3 5e-17 >seq583 Length=2047 Score = 93.3 bits (102), Expect = 5e-17 Identities = 84/103 (82%), Gaps = 7/103 (7%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGT---CCTATTCTATTATTCCATGCTAATGTATTCG- 65 ||||||||||||||| || ||| ||||| |||||||||||||||||||| | Sbjct 1619 AAACCAACAAAATAG--ACCGTCGTGGCCCTATCTCATTATTCCATGCTAATGTATCCAA 1562 Query 66 -GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 ||| ||||||||||||||||||||||||||| ||| ||||| Sbjct 1561 TGGCCTAAGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAA 1519 >seq555 Length=2081 Score = 93.3 bits (102), Expect = 5e-17 Identities = 84/103 (82%), Gaps = 7/103 (7%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGT---CCTATTCTATTATTCCATGCTAATGTATTCG- 65 ||||||||||||||| || ||| ||||| |||||||||||||||||||| | Sbjct 1638 AAACCAACAAAATAG--ACCGTCGTGGCCCTATCTCATTATTCCATGCTAATGTATCCAA 1581 Query 66 -GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 ||| ||||||||||||||||||||||||||| ||| ||||| Sbjct 1580 TGGCCTAAGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAA 1538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595192677180