Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ectocarpus_20siliculosus_20[genbank_20GCA_5F000310025.1_202010-06- 24] 1,270 sequences; 195,810,619 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq583 131 2e-28 seq555 131 2e-28 >seq583 Length=2047 Score = 131 bits (144), Expect = 2e-28 Identities = 142/183 (78%), Gaps = 9/183 (5%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGC--TCGAATACATTACCATG 70 |||||| |||||||||||||| ||||||||||||| | || | | |||||||| |||| Sbjct 1519 TTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCTTAGGCCATTGGATACATTAGCATG 1578 Query 71 GAATAATAGAATAGG---ACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAAT 127 ||||||| ||||| ||| |||| ||||||||| ||||| | | ||||| Sbjct 1579 GAATAATGAGATAGGGCCACGA-CGGT-CTATTTTGTTGGTTTGCACGTTGTG--GTAAT 1634 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATT 187 ||| || | | | || |||||| | |||||||||||||| |||||||||||||||||| Sbjct 1635 GATTAACAGGAACGGTTGGGGGTATTCGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 1694 Query 188 TAT 190 ||| Sbjct 1695 TAT 1697 >seq555 Length=2081 Score = 131 bits (144), Expect = 2e-28 Identities = 142/183 (78%), Gaps = 9/183 (5%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGC--TCGAATACATTACCATG 70 |||||| |||||||||||||| ||||||||||||| | || | | |||||||| |||| Sbjct 1538 TTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCTTAGGCCATTGGATACATTAGCATG 1597 Query 71 GAATAATAGAATAGG---ACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAAT 127 ||||||| ||||| ||| |||| ||||||||| ||||| | | ||||| Sbjct 1598 GAATAATGAGATAGGGCCACGA-CGGT-CTATTTTGTTGGTTTGCACGTTGTG--GTAAT 1653 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATT 187 ||| || | | | || |||||| | |||||||||||||| |||||||||||||||||| Sbjct 1654 GATTAACAGGAACGGTTGGGGGTATTCGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 1713 Query 188 TAT 190 ||| Sbjct 1714 TAT 1716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511993700800